General information
PDB ID 6WVJ
Title CRYO-EM STRUCTURE OF BACILLUS SUBTILIS RNA POLYMERASE ELONGATION COMPLEX
PDB header TRANSCRIPTION/DNA/RNA
Date 2020-05-06
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3.36
Kind hybrid
Organism BACILLUS SUBTILIS (STRAIN 168), ESCHERICHIA COLI BL21(DE3)
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6wvj.pdb ABCDF TN R 0
Biounits:
6wvj.pdb1.pdb ABCDF TN R 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RNA_pol_A_bac Domain P20429_53-171 2.3e-24 1 No_clan A 53 179   
RNA_pol_L Domain P20429_26-221 3e-21 1 CL0509 A 26 221   
RNA_pol_A_bac Domain P20429_53-171 2.3e-24 1 No_clan B 53 179   
RNA_pol_L Domain P20429_26-221 3e-21 1 CL0509 B 26 221   
RNA_pol_Rpb2_6 Domain A0A2J0WBQ0_675-1069 1.8e-150 1 CL0410 C 675 1069 RT   
RNA_pol_Rpb2_3 Domain A0A2J0WBQ0_469-537 5e-29 1 No_clan C 469 537 NR  L-Bb L-Mj L-Mn 
RNA_pol_Rpb2_2 Domain A0A2J0WBQ0_140-295 1.8e-27 1 No_clan C 140 295   
RNA_pol_Rpb2_7 Domain A0A2J0WBQ0_1071-1147 7.3e-27 1 No_clan C 1071 1147 T   
RNA_pol_Rpb2_45 Domain A0A2J0WBQ0_547-614 1.4e-25 1 No_clan C 547 614   
RNA_pol_Rpb2_2 Domain A0A2J0WBQ0_358-410 8.2e-07 1 No_clan C 358 410   
RNA_pol_Rpb1_1 Domain A0A063XB23_4-331 1.2e-89 1 No_clan D 4 331 NT  H-Bb L-Bb 
RNA_pol_Rpb1_5 Domain A0A063XB23_770-1131 6.1e-57 1 No_clan D 770 1131 T  H-Bb 
RNA_pol_Rpb1_3 Domain A0A063XB23_478-663 4.5e-36 1 No_clan D 478 663   
RNA_pol_Rpb1_2 Domain A0A063XB23_375-475 2.2e-29 1 No_clan D 375 475   
RNA_pol_Rpb1_4 Domain A0A063XB23_692-777 2.4e-14 1 No_clan D 692 777   
RNA_pol_Rpb1_2 Domain A0A063XB23_333-396 6.1e-09 1 No_clan D 333 396 T   
RNA_pol_Rpb2_1 Family A0A2J0WBQ0_28-456 1.9e-30 1 No_clan C 28 456   
RNA_pol_Rpb6 Family A0A063XI46_8-61 9.8e-13 1 No_clan F 8 61   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6wvj.pdb1.pdb:   [ download sequences in FASTA format ]
N (dna): 
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T (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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F (protein): 
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R (rna): 
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