General information
PDB ID 6X0N
Title BRIDGING OF DOUBLE-STRAND DNA BREAK ACTIVATES PARP2/HPF1 TO MODIFY CHROMATIN
PDB header GENE REGULATION
Date 2020-05-16
Experimental method ELECTRON MICROSCOPY
Resolution (A) 10
Kind dna
Organism XENOPUS LAEVIS, SYNTHETIC CONSTRUCT, HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6x0n.pdb ABCDEFGHabcdefghOPR IJij 0
Biounits:
6x0n.pdb1.pdb ABCDEFGHabcdefghOPR IJij 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Histone Domain P84233_37-132 3.8e-46 1 CL0012 A 37 131 IJ   
Histone Domain P84233_37-132 7.6e-46 1 CL0012 a 38 131 IJ   
CENP-T_C Domain P62799_26-99 4.2e-08 1 CL0012 b 26 98 IJ   
CENP-T_C Domain P62799_26-99 4.6e-08 1 CL0012 B 25 98 IJ   
Histone Domain P06897_13-91 4.6e-16 1 CL0012 C 10 90 IJ   
Histone Domain P06897_19-91 1.1e-15 1 CL0012 c 16 90 IJ   
Histone Domain P02281_33-102 1.8e-22 1 CL0012 D 25 98 IJ   
Histone Domain P02281_33-102 1.1e-21 1 CL0012 d 29 98 IJ   
Histone Domain P84233_37-132 3.8e-46 1 CL0012 E 37 131 IJj   
Histone Domain P84233_37-132 2.3e-45 1 CL0012 e 39 131 IJj   
CENP-T_C Domain P62799_26-99 4.2e-08 1 CL0012 f 26 98 Ij   
CENP-T_C Domain P62799_26-99 4.6e-08 1 CL0012 F 25 98 Ij   
Histone Domain P06897_13-91 4.6e-16 1 CL0012 G 10 90 IJ   
Histone Domain P06897_13-91 4.7e-16 1 CL0012 g 11 90 IJ   
Histone Domain P02281_33-102 1.8e-22 1 CL0012 H 25 98 IJ   
Histone Domain P02281_33-102 1.1e-21 1 CL0012 h 29 98 IJ   
PARP_reg Domain Q9UGN5_232-362 5.7e-48 1 No_clan P 219 349   
WGR Domain Q9UGN5_115-195 1.6e-27 1 No_clan P 102 182 IJ   
WGR Domain Q9UGN5_115-195 7.2e-29 1 No_clan R 102 182 IJi   
Histone_H2A_C Family P06897_92-120 4.2e-18 1 No_clan C 91 119   
Histone_H2A_C Family P06897_92-120 2.7e-16 1 No_clan c 91 117   
Histone_H2A_C Family P06897_92-120 4.2e-18 1 No_clan G 91 119 I   
Histone_H2A_C Family P06897_92-120 2.7e-15 1 No_clan g 91 116   
DUF2228 Family Q9NWY4_77-328 3.3e-110 1 No_clan O 77 328 I   
PARP Family Q9UGN5_376-577 2.5e-70 1 CL0084 P 363 564   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6x0n.pdb1.pdb:   [ download sequences in FASTA format ]
i (dna): 
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J (dna): 
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A (protein): 
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b (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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g (protein): 
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h (protein): 
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O (protein): 
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P (protein): 
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R (protein): 
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