General information
PDB ID 6XE0
Title CRYO-EM STRUCTURE OF NUSG-CTD BOUND TO 70S RIBOSOME (30S: NUSG-CTD FRAGMENT)
PDB header RIBOSOME
Date 2020-06-11
Experimental method ELECTRON MICROSCOPY
Resolution (A) 6.8
Kind rna
Organism ESCHERICHIA COLI (STRAIN K12), ESCHERICHIA COLI K-12
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6xe0.pdb ABCDEFGHIJKLMOPQRSTUV W 0
Biounits:
6xe0.pdb1.pdb ABCDEFGHIJKLMOPQRSTUV W 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_S3_C Domain P0A7V3_120-202 2e-40 1 No_clan B 119 201 W   
KH_2 Domain P0A7V3_38-111 7.3e-19 1 CL0007 B 37 110   
S4 Domain P0A7V8_96-143 1e-18 1 CL0492 C 95 142 W   
Ribosomal_S5_C Domain P0A7W1_87-157 3.7e-30 1 CL0329 D 86 156 W   
Ribosomal_S5 Domain P0A7W1_11-75 1e-29 1 CL0196 D 10 74 W   
Ribosomal_S6 Domain P02358_3-91 1.7e-28 1 No_clan E 3 91 W   
Ribosomal_S7 Domain P02359_2-149 1.2e-63 1 No_clan F 1 148 W   
Ribosomal_S8 Domain P0A7W7_5-130 3.8e-48 1 No_clan G 4 129 W   
Ribosomal_S10 Domain P0A7R5_7-101 1.9e-33 1 No_clan I 7 101 W   
Ribosomal_S15 Domain P0ADZ4_8-87 1.6e-37 1 CL0600 O 7 87 W   
Ribosomal_S17 Domain P0AG63_10-77 2.1e-34 1 CL0021 Q 9 76 W   
Ribosomal_S19 Domain P0A7U3_3-81 1.2e-35 1 No_clan S 2 80 W   
Ribosomal_S2 Family P0A7V0_9-224 2.2e-93 1 CL0067 A 8 223 W   
Ribosomal_S4 Family P0A7V8_3-95 1.8e-32 1 CL0492 C 2 94 W   
Ribosomal_S9 Family P0A7X3_10-130 1.1e-46 1 CL0329 H 9 129 W   
Ribosomal_S11 Family P0A7R9_19-128 1.5e-54 1 CL0267 J 18 127 W   
Ribosom_S12_S23 Family P0A7S3_12-123 5.6e-43 1 CL0021 K 11 122 W   
Ribosomal_S13 Family P0A7S9_3-108 7.4e-34 1 CL0303 L 2 107 W   
Ribosomal_S14 Family P0AG59_47-100 1.1e-26 1 No_clan M 47 100 W   
Ribosomal_S16 Family P0A7T3_8-68 1.1e-24 1 No_clan P 8 68 W   
Ribosomal_S18 Family P0A7T7_20-68 1.4e-24 1 CL0123 R 19 67 W   
Ribosomal_S20p Family P0A7U7_3-84 3.7e-27 1 No_clan T 2 83 W   
Ribosomal_S21 Family P68679_4-54 1.3e-21 1 No_clan U 3 53 W   
KOW Family P0AFG0_130-165 9.5e-09 1 CL0107 V 130 165 W   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6xe0.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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I (protein): 
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J (protein): 
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K (protein): 
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L (protein): 
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M (protein): 
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O (protein): 
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P (protein): 
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Q (protein): 
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R (protein): 
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S (protein): 
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T (protein): 
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U (protein): 
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V (protein): 
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W (rna): 
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