General information
PDB ID 9ANT
Title ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
PDB header TRANSCRIPTION/DNA
Date 1998-07-02
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.4
Kind dna
Organism DROSOPHILA MELANOGASTER
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb9ant.pdb AB CDEF 0
Biounits:
9ant.pdb1.pdb A CD 1
9ant.pdb2.pdb B EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Homeodomain Domain P02833_298-354 3.3e-22 1 CL0123 A 5 58 CD  H-Bb H-Mj L-Bb 
Homeodomain Domain P02833_298-354 3.3e-22 1 CL0123 B 5 58 EF  H-Bb H-Mj L-Bb L-Mn 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Homeodomain
Antennapedia Homeodomain A N/A N/A CD  H-Bb H-Mj L-Bb 
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Homeodomain
Antennapedia Homeodomain B N/A N/A EF  H-Bb H-Mj L-Bb L-Mn 
GO terms
Protein chains: GO type: GO description:
A/B=296-356 C cytoplasm
A/B=296-356 C nucleus
A/B=296-356 F DNA binding
A/B=296-356 F DNA-binding transcription factor activity, RNA polymerase II-specific
A/B=296-356 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B=296-356 F sequence-specific DNA binding
A/B=296-356 P anterior/posterior axis specification
A/B=296-356 P anterior/posterior pattern specification
A/B=296-356 P heart development
A/B=296-356 P lymph gland development
A/B=296-356 P midgut development
A/B=296-356 P muscle cell fate specification
A/B=296-356 P negative regulation of transcription by RNA polymerase II
A/B=296-356 P neuroblast development
A/B=296-356 P positive regulation of transcription by RNA polymerase II
A/B=296-356 P regulation of neurogenesis
A/B=296-356 P specification of segmental identity, antennal segment
A/B=296-356 P specification of segmental identity, thorax
A/B=296-356 P ventral cord development
Sequences
Download file with secondary structure created by Stride  
9ant.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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9ant.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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B (protein): 
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