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Nucleic atom dist Protein atom
DT406:B.OP2/1 3.09 GLN91:A.NE2/1
DT407:B.OP1/1 2.67 LYS108:A.N/1
DT407:B.OP2/1 3.24 HIS107:A.N/1
DG410:B.O6/1 2.91 ARG96:A.NH1/1
DC416:B.OP1/1 3.08 GLU31:A.N/1
DG417:B.OP1/1 3.13 GLN58:A.N/1
DG417:B.OP2/1 2.73 GLY57:A.N/1
DT418:B.OP2/1 2.53 LYS49:A.NZ/1
DT429:C.OP2/1 2.98 HIS43:A.NE2/1
DG430:C.O6/1 2.9 ARG46:A.NH2/1
DT439:C.OP2/1 2.58 THR97:A.OG1/1
DG440:C.N7/1 2.8 ARG96:A.NH2/1
DG440:C.O6/1 3.09 ARG96:A.NH1/1
DG440:C.O6/1 3.29 ARG96:A.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT407:B.OP2/1 2.52 134:B/1 2.85 THR95:A.OG1/1
DA409:B.N7/1 2.75 138:B/1 3.06 ARG96:A.NH1/1
DA409:B.N6/1 3.18 138:B/1 3.06 ARG96:A.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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