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Nucleic atom dist Protein atom
DT3:C.O2/1 2.94 LYS244:B.NZ/1
DC6:C.OP1/1 2.75 ARG159:B.NH1/1
DC6:C.OP1/1 2.81 VAL242:B.N/1
DC6:C.OP2/1 2.77 ARG159:B.NH2/1
DT7:C.OP2/1 2.88 SER257:B.N/1
DT11:C.OP2/1 2.5 SER47:B.OG/1
DT11:C.OP2/1 2.52 ARG50:B.NH1/1
DA12:C.OP1/1 2.92 ARG81:B.NH1/1
DA12:C.OP1/1 2.59 ARG81:B.NH2/1
DA12:C.N3/1 3 ARG282:B.NH2/1
DT13:C.OP2/1 2.97 ALA84:B.N/1
DA14:C.OP1/1 3.04 LYS132:B.N/1
DG15:C.OP2/1 2.68 ARG326:B.NH2/1
DG15:C.O3'/1 2.52 TYR324:B.OH/1
DG15:C.O6/1 2.9 LYS86:B.NZ/1
DG15:C.N3/1 2.89 LYS201:B.NZ/1
DT7:D.OP1/1 2.69 LYS122:B.NZ/1
DT7:D.OP2/1 2.82 SER38:A.N/1
DT7:D.OP2/1 2.59 THR41:A.OG1/1
DT7:D.O5'/1 2.98 SER38:A.OG/1
DA8:D.OP2/1 2.59 HIS40:A.ND1/1
DT9:D.OP1/1 2.87 ALA175:A.N/1
DA10:D.OP1/1 2.72 HIS289:A.N/1
DC11:D.OP1/1 2.64 TYR283:A.N/1
DG12:D.OP1/1 3.26 LYS276:A.NZ/1
DG12:D.N7/1 3.06 ARG259:A.NH2/1
DG12:D.O6/1 2.79 ARG259:A.NE/1
DC6:E.OP1/1 2.59 ARG159:A.NH1/1
DC6:E.OP1/1 2.84 VAL242:A.N/1
DC6:E.OP1/1 3.21 VAL242:A.O/1
DC6:E.OP2/1 3.34 ARG159:A.NH2/1
DT7:E.OP2/1 3.02 SER257:A.N/1
DG10:E.OP2/1 3.08 LYS43:A.NZ/1
DT11:E.OP2/1 2.46 SER47:A.OG/1
DT11:E.OP2/1 2.46 ARG50:A.NH2/1
DA12:E.OP2/1 3.4 HIS91:A.NE2/1
DA12:E.N3/1 3.25 ARG282:A.NH1/1
DA12:E.N3/1 2.98 ARG282:A.NH2/1
DT13:E.OP2/1 2.84 ALA84:A.N/1
DT13:E.OP2/1 2.42 THR87:A.OG1/1
DT13:E.O4'/1 3.08 ARG282:A.NH1/1
DA14:E.OP1/1 2.99 LYS132:A.N/1
DG15:E.OP1/1 2.61 TYR324:A.OH/1
DG15:E.O6/1 2.52 LYS86:A.NZ/1
DC16:E.OP1/1 3.01 ARG173:A.NH2/1
DC16:E.OP2/1 2.97 ARG292:A.NH2/1
DC16:E.OP2/1 2.72 TRP315:A.NE1/1
DC6:F.OP1/1 2.88 ARG101:B.NH1/1
DC6:F.OP2/1 2.65 ARG100:B.NH2/1
DT7:F.OP2/1 3.01 SER38:B.N/1
DT7:F.OP2/1 2.47 THR41:B.OG1/1
DT7:F.O4/1 2.9 GLN90:B.NE2/1
DT9:F.OP1/1 2.82 ALA175:B.N/1
DA10:F.OP1/1 2.51 SER287:B.OG/1
DA10:F.OP1/1 3.12 HIS289:B.N/1
DA10:F.OP2/1 2.65 GLU262:B.OE2/1
DA10:F.OP2/1 2.94 GLY288:B.N/1
DA10:F.N3/1 3.22 ARG282:B.NH2/1
DC11:F.OP1/1 2.74 TYR283:B.N/1
DG12:F.OP1/1 3.05 LYS276:B.NZ/1
DG12:F.N7/1 3.04 ARG259:B.NH2/1
DG12:F.O6/1 2.67 ARG259:B.NE/1
DT17:F.O2/1 3.03 ARG243:B.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA4:C.N3/1 2.89 415:B/1 2.89 LYS244:B.N/1
DA5:C.OP1/1 2.38 280:C/1 3.06 ARG243:B.O/1
DA5:C.O3'/1 3.17 429:B/1 2.83 ARG241:B.NE/1
DA5:C.O3'/1 3.17 429:B/1 2.83 ARG241:B.NH2/1
DA5:C.N3/1 2.69 185:C/1 2.75 ARG241:B.NH2/1
DG10:C.N7/1 2.53 42:C/1 2.72 LYS43:B.NZ/1
DA14:C.OP2/1 2.59 259:C/1 2.79 LYS86:B.N/1
DG15:C.OP1/1 2.42 218:C/1 2.64 GLN133:B.NE2/1
DG15:C.OP1/1 2.67 177:C/1 3.09 ALA134:B.N/1
DG15:C.OP1/1 2.42 218:C/1 3.18 ARG326:B.NH2/1
DC6:D.OP2/1 2.49 436:A/1 2.38 GLN94:A.OE1/1
DA10:D.N3/1 3.03 499:A/1 2.61 ARG282:A.NH2/1
DC11:D.OP1/1 3.15 399:A/1 2.9 LYS276:A.NZ/1
DC11:D.OP1/1 3.15 399:A/1 3.2 LEU284:A.N/1
DC11:D.O4'/1 2.7 499:A/1 2.61 ARG282:A.NH2/1
DC11:D.N4/1 2.58 42:D/1 2.95 GLU262:A.OE1/1
DG12:D.OP2/1 2.85 437:A/1 2.83 ARG259:A.NH2/1
DG12:D.OP2/1 2.85 437:A/1 2.7 GLU266:A.OE1/1
DA4:E.N3/1 3.08 496:A/1 2.77 LYS244:A.N/1
DA5:E.OP1/1 2.66 34:E/1 2.84 GLN156:A.OE1/1
DA5:E.OP1/1 2.66 34:E/1 3.14 ARG243:A.O/1
DA5:E.OP1/1 3.18 387:A/1 2.51 LYS244:A.O/1
DG15:E.N7/1 3.09 478:A/1 2.76 LYS86:A.NZ/1
DC16:E.OP2/1 2.96 402:A/1 2.68 ARG292:A.NE/1
DC16:E.OP2/1 2.96 402:A/1 2.49 TYR324:A.OH/1
DT2:F.OP1/1 2.65 36:F/1 2.66 LEU203:A.N/1
DT2:F.OP2/1 2.67 22:F/1 3.18 VAL204:A.N/1
DA8:F.OP1/1 3.07 520:B/1 2.97 ARG179:B.NH1/1
DA8:F.OP1/1 3.07 520:B/1 2.55 ARG179:B.NH2/1
DT9:F.OP1/1 3.06 370:B/1 2.68 GLU176:B.OE2/1
DT9:F.OP2/1 2.68 24:F/1 2.85 THR258:B.OG1/1
DC11:F.OP1/1 2.73 493:B/1 2.69 LYS276:B.NZ/1
DC11:F.N4/1 2.81 21:F/1 2.94 GLU262:B.OE1/1
DG12:F.OP2/1 3.25 419:B/1 2.89 GLU266:B.OE2/1
DA18:F.N3/1 2.63 23:F/1 2.78 ARG243:B.NH1/1
DT19:F.OP1/1 2.53 25:F/1 2.58 ASN245:B.OD1/1
DT19:F.OP1/1 2.58 32:F/1 3.38 ASN245:B.ND2/1
DT19:F.O3'/1 2.9 455:B/1 2.73 ASN245:B.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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