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Nucleic atom dist Protein atom
DT1002:B.OP1/1 3.38 ARG455:A.NE/1
DT1002:B.OP1/1 2.92 ARG455:A.NH2/1
DT1002:B.O2/1 3.36 LYS422:A.NZ/1
DT1003:B.OP1/1 3.19 GLN419:A.NE2/1
DT1003:B.OP1/1 2.96 MET458:A.N/1
DT1003:B.O4'/1 2.95 ASN420:A.ND2/1
DT1004:B.O3'/1 2.87 THR358:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT1002:B.O2/1 2.95 1140:A/1 2.9 GLN661:A.N/1
DT1003:B.O2/1 2.88 205:B/1 3.03 ASN420:A.ND2/1
DT1004:B.OP1/1 2.75 1131:A/1 2.94 THR356:A.O/1
DT1004:B.OP1/1 2.75 1131:A/1 2.66 ASP424:A.OD1/1
DT1004:B.OP1/1 2.64 1:B/1 2.96 ASP501:A.OD2/1
DT1004:B.N3/1 2.57 385:B/1 3.15 GLN483:A.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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