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Nucleic atom dist Protein atom
DT3:B.O2/1 2.58 LYS244:A.NZ/1
DC6:B.OP1/1 2.97 ARG159:A.NH1/1
DC6:B.OP1/1 3.24 VAL242:A.N/1
DC6:B.OP2/1 3.11 ARG159:A.NH2/1
DT7:B.OP2/1 2.89 SER257:A.N/1
DT7:B.OP2/1 2.62 SER257:A.OG/1
DT11:B.OP2/1 2.46 SER47:A.OG/1
DT11:B.OP2/1 2.34 ARG50:A.NH1/1
DA12:B.OP1/1 2.93 ARG81:A.NH1/1
DA12:B.OP2/1 2.85 ARG81:A.NH2/1
DA12:B.N3/1 2.6 ARG282:A.NH2/1
DT13:B.OP2/1 2.68 ALA84:A.N/1
DT13:B.OP2/1 2.79 THR87:A.OG1/1
DT13:B.O4/1 2.85 GLN90:A.NE2/1
DA14:B.OP1/1 2.73 LYS132:A.N/1
DG15:B.OP1/1 2.88 GLN133:A.NE2/1
DG15:B.OP2/1 2.52 ARG326:A.NH1/1
DG15:B.OP2/1 2.76 ARG326:A.NH2/1
DG15:B.O6/1 2.79 LYS86:A.NZ/1
DC16:B.OP2/1 2.85 TRP315:A.NE1/1
DT4:C.OP2/1 2.27 ARG121:A.NH2/1
DG5:C.OP1/1 2.28 ARG106:A.NH1/1
DG5:C.OP2/1 3.29 ASN96:A.ND2/1
DC6:C.OP1/1 2.4 ARG100:A.NH2/1
DT7:C.OP2/1 3.26 SER38:A.N/1
DT7:C.OP2/1 3 SER38:A.OG/1
DT7:C.OP2/1 2.43 THR41:A.OG1/1
DT7:C.O4/1 2.96 GLN90:A.NE2/1
DA8:C.O3'/1 2.89 ARG173:A.NH1/1
DT9:C.OP1/1 2.88 ALA175:A.N/1
DT9:C.O4/1 3.29 LYS43:A.NZ/1
DA10:C.OP1/1 2.72 SER287:A.OG/1
DA10:C.OP2/1 2.55 GLU262:A.OE2/1
DA10:C.OP2/1 2.91 GLY288:A.N/1
DA10:C.O4'/1 3.16 ARG282:A.NH1/1
DC11:C.OP1/1 2.67 TYR283:A.N/1
DG12:C.N7/1 2.66 ARG259:A.NH2/1
DG12:C.O6/1 2.61 ARG259:A.NE/1
DT17:C.O2/1 2.91 ARG243:A.NH2/1
DT19:C.OP1/1 2.85 ASN245:A.ND2/1
DT19:C.O2/1 2.6 LYS244:A.NZ/1
DT3:B.O2/2 2.58 LYS244:A.NZ/2
DC6:B.OP1/2 2.97 ARG159:A.NH1/2
DC6:B.OP1/2 3.24 VAL242:A.N/2
DC6:B.OP2/2 3.11 ARG159:A.NH2/2
DT7:B.OP2/2 2.89 SER257:A.N/2
DT7:B.OP2/2 2.62 SER257:A.OG/2
DT11:B.OP2/2 2.46 SER47:A.OG/2
DT11:B.OP2/2 2.34 ARG50:A.NH1/2
DA12:B.OP1/2 2.93 ARG81:A.NH1/2
DA12:B.OP2/2 2.85 ARG81:A.NH2/2
DA12:B.N3/2 2.6 ARG282:A.NH2/2
DT13:B.OP2/2 2.68 ALA84:A.N/2
DT13:B.OP2/2 2.79 THR87:A.OG1/2
DT13:B.O4/2 2.85 GLN90:A.NE2/2
DA14:B.OP1/2 2.73 LYS132:A.N/2
DG15:B.OP1/2 2.88 GLN133:A.NE2/2
DG15:B.OP2/2 2.52 ARG326:A.NH1/2
DG15:B.OP2/2 2.76 ARG326:A.NH2/2
DG15:B.O6/2 2.79 LYS86:A.NZ/2
DC16:B.OP2/2 2.85 TRP315:A.NE1/2
DT4:C.OP2/2 2.27 ARG121:A.NH2/2
DG5:C.OP1/2 2.28 ARG106:A.NH1/2
DG5:C.OP2/2 3.29 ASN96:A.ND2/2
DC6:C.OP1/2 2.4 ARG100:A.NH2/2
DT7:C.OP2/2 3.26 SER38:A.N/2
DT7:C.OP2/2 3 SER38:A.OG/2
DT7:C.OP2/2 2.43 THR41:A.OG1/2
DT7:C.O4/2 2.96 GLN90:A.NE2/2
DA8:C.O3'/2 2.89 ARG173:A.NH1/2
DT9:C.OP1/2 2.88 ALA175:A.N/2
DT9:C.O4/2 3.29 LYS43:A.NZ/2
DA10:C.OP1/2 2.72 SER287:A.OG/2
DA10:C.OP2/2 2.55 GLU262:A.OE2/2
DA10:C.OP2/2 2.91 GLY288:A.N/2
DA10:C.O4'/2 3.16 ARG282:A.NH1/2
DC11:C.OP1/2 2.67 TYR283:A.N/2
DG12:C.N7/2 2.66 ARG259:A.NH2/2
DG12:C.O6/2 2.61 ARG259:A.NE/2
DT17:C.O2/2 2.91 ARG243:A.NH2/2
DT19:C.OP1/2 2.85 ASN245:A.ND2/2
DT19:C.O2/2 2.6 LYS244:A.NZ/2
DT3:B.O2/3 2.58 LYS244:A.NZ/3
DC6:B.OP1/3 2.97 ARG159:A.NH1/3
DC6:B.OP1/3 3.24 VAL242:A.N/3
DC6:B.OP2/3 3.11 ARG159:A.NH2/3
DT7:B.OP2/3 2.89 SER257:A.N/3
DT7:B.OP2/3 2.62 SER257:A.OG/3
DT11:B.OP2/3 2.46 SER47:A.OG/3
DT11:B.OP2/3 2.34 ARG50:A.NH1/3
DA12:B.OP1/3 2.93 ARG81:A.NH1/3
DA12:B.OP2/3 2.85 ARG81:A.NH2/3
DA12:B.N3/3 2.6 ARG282:A.NH2/3
DT13:B.OP2/3 2.68 ALA84:A.N/3
DT13:B.OP2/3 2.79 THR87:A.OG1/3
DT13:B.O4/3 2.85 GLN90:A.NE2/3
DA14:B.OP1/3 2.73 LYS132:A.N/3
DG15:B.OP1/3 2.88 GLN133:A.NE2/3
DG15:B.OP2/3 2.52 ARG326:A.NH1/3
DG15:B.OP2/3 2.76 ARG326:A.NH2/3
DG15:B.O6/3 2.79 LYS86:A.NZ/3
DC16:B.OP2/3 2.85 TRP315:A.NE1/3
DT4:C.OP2/3 2.27 ARG121:A.NH2/3
DG5:C.OP1/3 2.28 ARG106:A.NH1/3
DG5:C.OP2/3 3.29 ASN96:A.ND2/3
DC6:C.OP1/3 2.4 ARG100:A.NH2/3
DT7:C.OP2/3 3.26 SER38:A.N/3
DT7:C.OP2/3 3 SER38:A.OG/3
DT7:C.OP2/3 2.43 THR41:A.OG1/3
DT7:C.O4/3 2.96 GLN90:A.NE2/3
DA8:C.O3'/3 2.89 ARG173:A.NH1/3
DT9:C.OP1/3 2.88 ALA175:A.N/3
DT9:C.O4/3 3.29 LYS43:A.NZ/3
DA10:C.OP1/3 2.72 SER287:A.OG/3
DA10:C.OP2/3 2.55 GLU262:A.OE2/3
DA10:C.OP2/3 2.91 GLY288:A.N/3
DA10:C.O4'/3 3.16 ARG282:A.NH1/3
DC11:C.OP1/3 2.67 TYR283:A.N/3
DG12:C.N7/3 2.66 ARG259:A.NH2/3
DG12:C.O6/3 2.61 ARG259:A.NE/3
DT17:C.O2/3 2.91 ARG243:A.NH2/3
DT19:C.OP1/3 2.85 ASN245:A.ND2/3
DT19:C.O2/3 2.6 LYS244:A.NZ/3
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Nucleic atom d_n2w water d_p2w Protein atom
DA4:B.N3/1 3.05 434:A/1 3.31 ARG243:A.NH1/1
DA4:B.N3/1 3.05 434:A/1 2.85 LYS244:A.N/1
DA5:B.O4'/1 3.17 434:A/1 2.85 LYS244:A.N/1
DA5:B.O3'/1 3.08 360:A/1 2.66 ARG241:A.NE/1
DA5:B.O3'/1 3.08 360:A/1 2.81 ARG241:A.NH2/1
DA5:B.N3/1 2.53 24:B/1 2.56 ARG241:A.NH2/1
DC6:B.OP2/1 2.48 20:B/1 2.84 VAL242:A.O/1
DA12:B.OP2/1 3.01 424:A/1 2.83 HIS91:A.NE2/1
DA14:B.OP2/1 2.9 383:A/1 2.76 LYS86:A.N/1
DA14:B.N7/1 2.85 28:B/1 3.01 LYS86:A.O/1
DA14:B.N6/1 2.7 28:B/1 3.01 LYS86:A.O/1
DG15:B.OP1/1 2.75 17:B/1 2.76 ALA134:A.N/1
DC16:B.OP2/1 2.73 400:A/1 2.43 ILE320:A.O/1
DA1:C.O5'/1 3 351:A/2 3.39 THR316:A.N/2
DG5:C.O6/1 2.29 25:C/1 3.34 LYS86:A.NZ/1
DT9:C.OP2/1 2.92 21:C/1 3.09 HIS40:A.NE2/1
DT9:C.OP2/1 2.98 432:A/1 2.65 THR258:A.OG1/1
DC11:C.N4/1 2.94 370:A/1 2.6 GLU262:A.OE1/1
DA4:B.N3/2 3.05 434:A/2 3.31 ARG243:A.NH1/2
DA4:B.N3/2 3.05 434:A/2 2.85 LYS244:A.N/2
DA5:B.O4'/2 3.17 434:A/2 2.85 LYS244:A.N/2
DA5:B.O3'/2 3.08 360:A/2 2.66 ARG241:A.NE/2
DA5:B.O3'/2 3.08 360:A/2 2.81 ARG241:A.NH2/2
DA5:B.N3/2 2.53 24:B/2 2.56 ARG241:A.NH2/2
DC6:B.OP2/2 2.48 20:B/2 2.84 VAL242:A.O/2
DA12:B.OP2/2 3.01 424:A/2 2.83 HIS91:A.NE2/2
DA14:B.OP2/2 2.9 383:A/2 2.76 LYS86:A.N/2
DA14:B.N7/2 2.85 28:B/2 3.01 LYS86:A.O/2
DA14:B.N6/2 2.7 28:B/2 3.01 LYS86:A.O/2
DG15:B.OP1/2 2.75 17:B/2 2.76 ALA134:A.N/2
DC16:B.OP2/2 2.73 400:A/2 2.43 ILE320:A.O/2
DA1:C.O5'/2 3 351:A/3 3.39 THR316:A.N/3
DG5:C.O6/2 2.29 25:C/2 3.34 LYS86:A.NZ/2
DT9:C.OP2/2 2.92 21:C/2 3.09 HIS40:A.NE2/2
DT9:C.OP2/2 2.98 432:A/2 2.65 THR258:A.OG1/2
DC11:C.N4/2 2.94 370:A/2 2.6 GLU262:A.OE1/2
DA4:B.N3/3 3.05 434:A/3 3.31 ARG243:A.NH1/3
DA4:B.N3/3 3.05 434:A/3 2.85 LYS244:A.N/3
DA5:B.O4'/3 3.17 434:A/3 2.85 LYS244:A.N/3
DA5:B.O3'/3 3.08 360:A/3 2.66 ARG241:A.NE/3
DA5:B.O3'/3 3.08 360:A/3 2.81 ARG241:A.NH2/3
DA5:B.N3/3 2.53 24:B/3 2.56 ARG241:A.NH2/3
DC6:B.OP2/3 2.48 20:B/3 2.84 VAL242:A.O/3
DA12:B.OP2/3 3.01 424:A/3 2.83 HIS91:A.NE2/3
DA14:B.OP2/3 2.9 383:A/3 2.76 LYS86:A.N/3
DA14:B.N7/3 2.85 28:B/3 3.01 LYS86:A.O/3
DA14:B.N6/3 2.7 28:B/3 3.01 LYS86:A.O/3
DG15:B.OP1/3 2.75 17:B/3 2.76 ALA134:A.N/3
DC16:B.OP2/3 2.73 400:A/3 2.43 ILE320:A.O/3
DA1:C.O5'/3 3 351:A/1 3.39 THR316:A.N/1
DG5:C.O6/3 2.29 25:C/3 3.34 LYS86:A.NZ/3
DT9:C.OP2/3 2.92 21:C/3 3.09 HIS40:A.NE2/3
DT9:C.OP2/3 2.98 432:A/3 2.65 THR258:A.OG1/3
DC11:C.N4/3 2.94 370:A/3 2.6 GLU262:A.OE1/3
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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