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Nucleic atom dist Protein atom
DA7:C.OP2/1 2.51 TYR426:A.OH/1
DA7:C.O5'/1 3.05 TYR426:A.OH/1
DC8:C.OP1/1 3.29 LYS216:A.NZ/1
DC8:C.OP2/1 2.9 THR411:A.N/1
DC8:C.OP2/1 2.64 THR411:A.OG1/1
DC8:C.O5'/1 3.02 THR411:A.OG1/1
DC10:C.OP1/1 3.04 LYS587:A.NZ/1
DC10:C.OP2/1 2.79 LYS443:A.NZ/1
DC10:C.O2/1 2.89 LYS532:A.NZ/1
DA11:C.OP1/1 2.56 ARG488:A.NH2/1
DA11:C.OP1/1 3.17 LYS532:A.NZ/1
DA11:C.OP2/1 3.3 ARG590:A.NH1/1
DA11:C.OP2/1 2.56 HIS632:A.NE2/1
DG12:C.OP1/1 2.93 GLN633:A.N/1
DG12:C.N3/1 2.99 ARG364:A.NH2/1
DT109:D.OP1/1 2.69 THR747:A.OG1/1
DT109:D.OP2/1 3.42 ASN745:A.ND2/1
DG113:D.OP1/1 3.17 LYS374:A.NZ/1
DG113:D.OP2/1 2.46 LYS425:A.NZ/1
DA114:D.OP1/1 2.57 ARG364:A.N/1
DA114:D.OP1/1 3.11 HIS367:A.ND1/1
DG115:D.OP1/1 2.65 THR501:A.OG1/1
DG115:D.OP1/1 3.17 ASP533:A.N/1
DT116:D.OP1/1 2.62 GLY490:A.N/1
DT116:D.OP2/1 3.12 ASN491:A.N/1
DT116:D.OP2/1 3.12 ASN491:A.ND2/1
DC117:D.OP1/1 2.52 THR585:A.OG1/1
DC117:D.OP1/1 2.46 LYS587:A.N/1
DC117:D.OP2/1 2.96 ASN574:A.ND2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA7:C.OP2/1 2.87 1256:C/1 3.38 ARG405:A.NH1/1
DT9:C.OP1/1 2.79 1063:C/1 2.98 ILE435:A.O/1
DT9:C.OP1/1 2.97 1047:A/1 2.69 LYS436:A.O/1
DT9:C.OP1/1 2.79 1063:C/1 3.01 LYS436:A.NZ/1
DC10:C.OP1/1 2.65 1006:A/1 3.15 THR591:A.OG1/1
DC10:C.OP1/1 2.65 1006:A/1 2.58 ASN722:A.O/1
DA11:C.N3/1 2.88 1268:C/1 2.99 ASP533:A.OD1/1
DA11:C.N3/1 2.88 1268:C/1 2.96 ASP533:A.OD2/1
DG12:C.OP1/1 2.36 1197:C/1 2.96 ASN631:A.O/1
DG12:C.N7/1 2.8 1297:A/1 2.79 THR718:A.OG1/1
DG12:C.N2/1 3.23 1165:C/1 3.23 ARG364:A.NH2/1
DT112:D.OP1/1 2.51 1077:D/1 3.16 PRO357:A.O/1
DT112:D.OP1/1 2.51 1077:D/1 2.65 LYS374:A.NZ/1
DG113:D.OP1/1 2.81 1065:D/1 3 ARG362:A.N/1
DG113:D.N3/1 2.94 1268:C/1 2.99 ASP533:A.OD1/1
DG113:D.N3/1 2.94 1268:C/1 2.96 ASP533:A.OD2/1
DA114:D.OP1/1 2.87 1090:D/1 3.05 ARG364:A.O/1
DG115:D.OP1/1 2.8 1015:A/1 2.74 SER534:A.OG/1
DG115:D.O5'/1 2.87 1017:D/1 2.99 THR501:A.OG1/1
DG115:D.N3/1 3.12 1005:A/1 2.75 LYS532:A.NZ/1
DC117:D.OP2/1 2.72 1016:D/1 2.73 ASN491:A.ND2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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