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Nucleic atom dist Protein atom
DC1:M.O3'/1 3.22 LYS125:B.NZ/1
DA2:M.OP1/1 3.19 LYS125:B.NZ/1
DA2:M.OP2/1 2.79 ARG153:B.NE/1
DA4:M.N7/1 3.24 GLN154:B.OE1/1
DA4:M.N6/1 3.09 GLN154:B.NE2/1
DT6:M.OP1/1 3.28 SER56:B.OG/1
DT7:M.OP1/1 3.1 LYS62:B.NZ/1
DT7:M.OP2/1 3.1 ASN59:B.ND2/1
DG8:M.OP1/1 3 ASP41:B.O/1
DG8:M.OP2/1 2.65 SER43:B.OG/1
DG8:M.OP2/1 2.89 THR46:B.OG1/1
DG8:M.N7/1 3.37 ARG49:B.NH1/1
DG8:M.O6/1 2.41 ARG49:B.NH2/1
DA9:M.N6/1 2.77 THR45:B.OG1/1
DA10:M.OP1/1 2.35 ARG20:A.NH2/1
DA10:M.OP1/1 2.95 SER107:B.OG/1
DA10:M.OP2/1 2.88 GLN27:A.N/1
DA11:M.OP2/1 2.82 GLN27:A.NE2/1
DA11:M.OP2/1 2.55 SER48:A.OG/1
DA11:M.N7/1 2.45 GLN44:A.NE2/1
DA11:M.N6/1 2.92 GLN44:A.OE1/1
DA11:M.N6/1 3.22 GLN44:A.NE2/1
DA15:M.OP2/1 2.94 LYS155:A.NZ/1
DA15:M.N3/1 2.68 ARG105:A.NH1/1
DA16:M.O4'/1 3.04 ARG105:A.NH1/1
DA16:M.O3'/1 3.03 THR106:A.N/1
DA17:M.OP1/1 2.95 THR106:A.N/1
DA17:M.OP1/1 2.24 THR106:A.OG1/1
DA17:M.N7/1 3.24 ASN151:A.ND2/1
DA17:M.N6/1 3.22 ASN151:A.OD1/1
DT18:M.OP1/1 2.74 LYS103:A.N/1
DT2:N.OP1/1 3.31 ARG153:A.NH2/1
DC3:N.OP1/1 2.97 ARG153:A.NE/1
DC3:N.OP2/1 2.81 ARG153:A.NE/1
DC3:N.OP2/1 2.63 ARG153:A.NH2/1
DC4:N.OP2/1 2.48 LYS157:A.NZ/1
DA5:N.N7/1 2.97 GLN154:A.OE1/1
DA5:N.N6/1 2.92 GLN154:A.NE2/1
DT7:N.OP1/1 2.84 SER56:A.OG/1
DT8:N.OP2/1 3.29 ASN59:A.ND2/1
DG9:N.OP1/1 3.23 ASP41:A.O/1
DG9:N.OP2/1 2.99 SER43:A.N/1
DG9:N.OP2/1 2.39 SER43:A.OG/1
DG9:N.OP2/1 2.65 THR46:A.OG1/1
DG9:N.N7/1 3.03 ARG49:A.NH1/1
DG9:N.O6/1 2.44 ARG49:A.NH2/1
DC10:N.N4/1 3.05 THR45:A.OG1/1
DC11:N.OP1/1 2.66 ARG20:B.NH2/1
DC11:N.OP2/1 3.03 GLN27:B.N/1
DT12:N.OP2/1 2.92 GLN27:B.NE2/1
DT12:N.OP2/1 2.87 SER48:B.OG/1
DT12:N.O4/1 2.42 GLN44:B.NE2/1
DT13:N.O4/1 3.03 THR45:B.OG1/1
DA16:N.OP1/1 2.75 LYS155:B.NZ/1
DA16:N.N3/1 2.69 ARG105:B.NH1/1
DA17:N.O4'/1 2.75 ARG105:B.NH1/1
DA17:N.O3'/1 3.33 THR106:B.N/1
DA18:N.OP1/1 2.98 THR106:B.N/1
DA18:N.N7/1 3.17 ASN151:B.ND2/1
DA18:N.N6/1 3.42 ASN151:B.OD1/1
DT19:N.OP1/1 3.1 LYS103:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA2:M.OP2/1 2.7 2032:B/1 3.26 SER150:B.O/1
DA2:M.OP2/1 2.7 2032:B/1 2.53 SER150:B.OG/1
DC3:M.N4/1 3.16 2033:B/1 2.9 ASN151:B.OD1/1
DC3:M.N4/1 3.16 2033:B/1 2.96 GLN154:B.NE2/1
DT7:M.OP2/1 2.67 2008:M/1 2.94 ASN59:B.ND2/1
DA11:M.OP2/1 2.94 2009:A/1 2.86 GLU51:A.OE1/1
DA15:M.N7/1 2.94 2011:M/1 3.46 ARG158:A.NH2/1
DA16:M.OP1/1 2.85 2014:M/1 3.4 ARG113:A.NE/1
DA16:M.OP1/1 2.85 2014:M/1 2.89 TRP148:A.NE1/1
DA16:M.OP2/1 2.57 2012:M/1 2.73 ASN151:A.ND2/1
DT2:N.OP1/1 2.83 2034:A/1 2.8 ARG146:A.O/1
DT2:N.OP1/1 2.89 2001:N/1 2.94 ARG153:A.NH1/1
DT2:N.OP1/1 2.83 2034:A/1 3.04 ARG153:A.NH2/1
DC3:N.OP2/1 2.76 2004:N/1 2.98 SER150:A.OG/1
DC4:N.N4/1 2.5 2006:N/1 2.85 SER150:A.OG/1
DC4:N.N4/1 2.5 2006:N/1 2.6 GLN154:A.NE2/1
DA17:N.OP1/1 2.91 2018:N/1 3.19 ILE108:B.N/1
DA17:N.OP1/1 3.21 2031:B/1 3.08 TRP148:B.NE1/1
DA17:N.OP2/1 2.41 2017:N/1 2.99 ASN151:B.ND2/1
DA17:N.O5'/1 2.76 2017:N/1 2.99 ASN151:B.ND2/1
DA18:N.OP2/1 2.63 2030:B/1 2.54 VAL144:B.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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