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Nucleic atom dist Protein atom
G16:C.OP2/1 3.14 ARG65:A.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
U11:C.OP2/1 3.08 203:C/1 3.05 GLY41:A.O/1
G18:F.O5'/1 3.1 216:F/1 3.17 LYS113:A.NZ/1
G18:F.O5'/1 2.69 220:F/1 3.03 LYS113:A.NZ/1
G19:F.N7/1 2.91 216:F/1 3.17 LYS113:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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