Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DG2:B.N7/1 2.84 ARG180:A.NH2/1
DG2:B.O6/1 2.99 ARG180:A.NH1/1
DC3:B.N4/1 3.37 ARG180:A.NH1/1
DG4:B.OP1/1 2.8 HIS153:A.ND1/1
DG4:B.N7/1 2.88 ARG174:A.NH1/1
DG4:B.O6/1 2.78 ARG174:A.NH2/1
DG6:B.OP2/1 2.76 SER145:A.OG/1
DG6:B.N7/1 2.67 HIS149:A.NE2/1
DG7:B.OP1/1 2.99 HIS125:A.ND1/1
DG7:B.N7/1 2.92 ARG146:A.NH1/1
DG7:B.O6/1 2.74 ARG146:A.NH2/1
DG8:B.OP1/1 3.04 ARG103:A.NH2/1
DG8:B.N7/1 2.91 ARG124:A.NH2/1
DG8:B.O6/1 3.04 ARG124:A.NH1/1
DC9:B.N4/1 2.85 GLU121:A.OE2/1
DC9:B.N4/1 3.54 ARG124:A.NH1/1
DC55:C.N4/1 2.98 ASP148:A.OD1/1
DC56:C.OP2/1 2.72 SER175:A.OG/1
DC57:C.OP2/1 2.65 LYS179:A.NZ/1
DA58:C.N6/1 3.21 ASP176:A.OD1/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG2:B.OP2/1 2.97 412:A/1 2.93 LYS161:A.NZ/1
DC3:B.N4/1 2.82 303:B/1 3.09 ASP176:A.OD1/1
DG4:B.OP2/1 2.9 346:B/1 3 HIS149:A.O/1
DG4:B.OP2/1 2.65 343:B/1 2.8 THR152:A.OG1/1
DG4:B.OP2/1 2.65 343:B/1 3.05 ARG174:A.NH1/1
DT5:B.OP2/1 2.62 317:B/1 3.07 LYS133:A.NZ/1
DT5:B.OP2/1 2.62 317:B/1 2.83 ARG142:A.NE/1
DT5:B.OP2/1 2.62 317:B/1 3.19 ARG142:A.NH2/1
DT5:B.OP2/1 2.62 317:B/1 2.84 ASN143:A.O/1
DT5:B.OP2/1 2.94 324:B/1 3.1 SER145:A.N/1
DG6:B.OP2/1 3.15 360:B/1 3.15 ARG146:A.NH1/1
DC9:B.OP2/1 2.97 407:A/1 2.36 SER117:A.OG/1
DT10:B.O4/1 2.69 325:A/1 2.98 GLU121:A.OE1/1
DG11:B.O6/1 2.98 387:A/1 2.58 ARG118:A.NH1/1
DT51:C.O5'/1 2.88 333:C/1 3.13 ALA120:A.O/1
DT51:C.O5'/1 2.88 333:C/1 3.04 ALA120:A.O/1
DA53:C.OP2/1 2.43 378:C/1 2.76 SER147:A.OG/1
DG54:C.OP2/1 2.95 358:A/1 2.85 SER147:A.OG/1
DG54:C.N7/1 2.9 376:C/1 3.05 ASP148:A.OD2/1
DG54:C.O6/1 2.72 339:C/1 3.06 ARG124:A.NH1/1
DC56:C.N4/1 2.95 380:A/1 2.86 ASP148:A.OD1/1
DC57:C.N4/1 3 322:A/1 2.97 ASP176:A.OD2/1
DA58:C.OP2/1 2.82 373:C/1 3.05 LYS179:A.NZ/1
DG60:C.O6/1 2.95 398:C/1 3 ARG180:A.NH1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text