Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA407:B.N3/1 2.93 GLN69:A.NE2/1
DC409:B.OP1/1 2.86 VAL88:A.N/1
DC409:B.OP1/1 2.67 SER104:A.OG/1
DG428:C.OP1/1 2.71 LYS52:A.NZ/1
DG428:C.OP2/1 3.04 ASN168:A.N/1
DG428:C.OP2/1 2.78 ARG252:A.NH2/1
DG428:C.N2/1 3.06 GLN69:A.NE2/1
DA429:C.OP1/1 2.74 HIS67:A.NE2/1
DA429:C.OP2/1 2.72 LYS52:A.NZ/1
DA430:C.OP2/1 2.47 ARG124:A.NE/1
DA430:C.OP2/1 2.49 ARG124:A.NH2/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DC403:B.OP2/1 2.35 993:A/1 2.29 SER251:A.OG/1
DC409:B.OP2/1 2.71 785:A/1 2.58 THR86:A.O/1
DC410:B.OP1/1 2.95 1016:B/1 3.31 ARG75:A.NH2/1
DC410:B.OP1/1 2.95 1016:B/1 2.98 ARG87:A.NE/1
DC410:B.OP2/1 2.9 942:B/1 3.08 THR86:A.OG1/1
DA426:C.OP1/1 2.67 696:C/1 2.69 TYR255:A.OH/1
DA426:C.O3'/1 3.1 686:A/1 2.7 HIS231:A.NE2/1
DA426:C.O3'/1 3.13 735:A/1 3 HIS231:A.NE2/1
DG428:C.OP2/1 2.68 664:C/1 2.73 ARG252:A.NH1/1
DG428:C.N2/1 3.06 789:A/1 3.01 ASP107:A.OD2/1
DA429:C.OP1/1 2.81 605:A/1 2.82 LYS52:A.N/1
DA429:C.OP1/1 2.81 605:A/1 2.72 GLN160:A.OE1/1
DA429:C.OP2/1 2.68 638:C/1 2.69 LEU158:A.O/1
DA430:C.OP1/1 2.61 946:C/1 3.29 ARG124:A.NE/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text