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Nucleic atom dist Protein atom
DT2:C.O2/1 2.9 LYS244:B.NZ/1
DG5:C.OP1/1 2.5 ARG159:B.NH1/1
DG5:C.OP1/1 2.86 VAL242:B.N/1
DG5:C.OP2/1 2.96 ARG159:B.NH2/1
DT6:C.OP2/1 3.28 SER257:B.N/1
DT6:C.OP2/1 2.43 SER257:B.OG/1
DG9:C.N7/1 2.29 LYS43:B.NZ/1
DT10:C.OP2/1 2.44 SER47:B.OG/1
DT10:C.OP2/1 2.3 ARG50:B.NH1/1
DA11:C.OP1/1 3.14 ARG81:B.NH1/1
DA11:C.OP1/1 2.68 ARG81:B.NH2/1
DA11:C.N3/1 2.83 ARG282:B.NH2/1
DT12:C.OP2/1 2.82 ALA84:B.N/1
DA13:C.OP1/1 2.86 LYS132:B.N/1
DA14:C.OP1/1 2.75 TYR324:B.OH/1
DA14:C.N7/1 2.41 LYS86:B.NZ/1
DA14:C.N3/1 2.44 LYS201:B.NZ/1
DT15:C.OP1/1 2.57 ARG173:B.NE/1
DT15:C.OP1/1 2.87 ARG173:B.NH2/1
DT15:C.OP2/1 2.91 TRP315:B.NE1/1
DT15:C.O5'/1 2.91 ARG173:B.NH2/1
DT15:C.O4'/1 3.3 LYS201:B.NZ/1
DG16:C.OP1/1 2.62 THR316:B.N/1
DG16:C.OP1/1 2.53 THR316:B.N/1
DC21:C.O3'/1 3.21 ARG118:B.NH2/2
DT22:C.OP2/1 3.18 SER38:A.N/2
DT22:C.OP2/1 2.33 THR41:A.OG1/2
DT22:C.O4/1 2.98 GLN90:A.OE1/2
DT24:C.OP1/1 2.66 ALA175:A.N/2
DA25:C.OP1/1 2.63 HIS289:A.N/2
DA25:C.O4'/1 3.05 ARG282:A.NH1/2
DC26:C.OP1/1 2.3 TYR283:A.N/2
DG27:C.OP1/1 3.36 LYS276:A.NZ/2
DG27:C.N7/1 2.49 ARG259:A.NH2/2
DG27:C.O6/1 2.72 ARG259:A.NE/2
DT2:D.O2/1 2.34 LYS244:A.NZ/1
DC5:D.OP1/1 2.69 ARG159:A.NH1/1
DC5:D.OP1/1 2.66 VAL242:A.N/1
DC5:D.OP2/1 2.92 GLN156:A.OE1/1
DC5:D.OP2/1 3.22 ARG159:A.NH2/1
DT6:D.OP2/1 3.01 SER257:A.N/1
DT10:D.OP2/1 2.86 SER47:A.OG/1
DT10:D.OP2/1 3.1 ARG50:A.NH2/1
DA11:D.OP1/1 2.29 ARG81:A.NH2/1
DA11:D.OP2/1 2.93 ARG81:A.NH1/1
DA11:D.N3/1 2.59 ARG282:A.NH2/1
DT12:D.OP2/1 2.68 ALA84:A.N/1
DT12:D.OP2/1 2.93 THR87:A.OG1/1
DT12:D.O4/1 3.06 GLN90:A.OE1/1
DA13:D.OP1/1 2.77 LYS132:A.N/1
DG14:D.OP1/1 2.53 TYR324:A.OH/1
DC15:D.OP1/1 2.7 ARG173:A.NH2/1
DC15:D.OP2/1 3.05 ARG292:A.NH2/1
DC15:D.OP2/1 2.41 TRP315:A.NE1/1
DT17:D.OP1/1 3.27 LYS201:A.O/1
DT17:D.OP2/1 3.09 LYS201:A.O/1
DA18:D.OP2/1 2.69 ARG121:B.NE/1
DA18:D.OP2/1 3.19 ARG121:B.NH2/1
DA20:D.OP2/1 3.06 ARG100:B.NH1/1
DA20:D.OP2/1 2.88 ARG106:B.NH1/1
DT21:D.OP1/1 3.27 ARG101:B.NE/1
DT21:D.OP1/1 2.87 ARG101:B.NH2/1
DT21:D.OP2/1 2.28 ARG100:B.NH2/1
DT22:D.OP1/1 2.89 ARG118:A.NH2/2
DT22:D.OP2/1 2.87 SER38:B.N/1
DT22:D.OP2/1 2.65 THR41:B.OG1/1
DT22:D.O4/1 2.84 GLN90:B.OE1/1
DT24:D.OP1/1 2.98 ALA175:B.N/1
DA25:D.OP1/1 2.67 SER287:B.OG/1
DA25:D.OP1/1 3.19 HIS289:B.N/1
DA25:D.OP2/1 2.76 GLU262:B.OE2/1
DA25:D.OP2/1 2.76 GLY288:B.N/1
DA25:D.O4'/1 3.17 ARG282:B.NH1/1
DA25:D.N3/1 3.36 ARG282:B.NH2/1
DC26:D.OP1/1 2.86 TYR283:B.N/1
DG27:D.N7/1 2.98 ARG259:B.NH2/1
DG27:D.O6/1 2.73 ARG259:B.NE/1
DT32:D.O2/1 2.93 ARG243:B.NH1/1
DT32:D.O2/1 3.13 ARG243:B.NH2/1
DT2:C.O2/2 2.9 LYS244:B.NZ/2
DG5:C.OP1/2 2.5 ARG159:B.NH1/2
DG5:C.OP1/2 2.86 VAL242:B.N/2
DG5:C.OP2/2 2.96 ARG159:B.NH2/2
DT6:C.OP2/2 3.28 SER257:B.N/2
DT6:C.OP2/2 2.43 SER257:B.OG/2
DG9:C.N7/2 2.29 LYS43:B.NZ/2
DT10:C.OP2/2 2.44 SER47:B.OG/2
DT10:C.OP2/2 2.3 ARG50:B.NH1/2
DA11:C.OP1/2 3.14 ARG81:B.NH1/2
DA11:C.OP1/2 2.68 ARG81:B.NH2/2
DA11:C.N3/2 2.83 ARG282:B.NH2/2
DT12:C.OP2/2 2.82 ALA84:B.N/2
DA13:C.OP1/2 2.86 LYS132:B.N/2
DA14:C.OP1/2 2.75 TYR324:B.OH/2
DA14:C.N7/2 2.41 LYS86:B.NZ/2
DA14:C.N3/2 2.44 LYS201:B.NZ/2
DT15:C.OP1/2 2.57 ARG173:B.NE/2
DT15:C.OP1/2 2.87 ARG173:B.NH2/2
DT15:C.OP2/2 2.91 TRP315:B.NE1/2
DT15:C.O5'/2 2.91 ARG173:B.NH2/2
DT15:C.O4'/2 3.3 LYS201:B.NZ/2
DG16:C.OP1/2 2.62 THR316:B.N/2
DG16:C.OP1/2 2.53 THR316:B.N/2
DC21:C.O3'/2 3.21 ARG118:B.NH2/1
DT22:C.OP2/2 3.18 SER38:A.N/1
DT22:C.OP2/2 2.33 THR41:A.OG1/1
DT22:C.O4/2 2.98 GLN90:A.OE1/1
DT24:C.OP1/2 2.66 ALA175:A.N/1
DA25:C.OP1/2 2.63 HIS289:A.N/1
DA25:C.O4'/2 3.05 ARG282:A.NH1/1
DC26:C.OP1/2 2.3 TYR283:A.N/1
DG27:C.OP1/2 3.36 LYS276:A.NZ/1
DG27:C.N7/2 2.49 ARG259:A.NH2/1
DG27:C.O6/2 2.72 ARG259:A.NE/1
DT2:D.O2/2 2.34 LYS244:A.NZ/2
DC5:D.OP1/2 2.69 ARG159:A.NH1/2
DC5:D.OP1/2 2.66 VAL242:A.N/2
DC5:D.OP2/2 2.92 GLN156:A.OE1/2
DC5:D.OP2/2 3.22 ARG159:A.NH2/2
DT6:D.OP2/2 3.01 SER257:A.N/2
DT10:D.OP2/2 2.86 SER47:A.OG/2
DT10:D.OP2/2 3.1 ARG50:A.NH2/2
DA11:D.OP1/2 2.29 ARG81:A.NH2/2
DA11:D.OP2/2 2.93 ARG81:A.NH1/2
DA11:D.N3/2 2.59 ARG282:A.NH2/2
DT12:D.OP2/2 2.68 ALA84:A.N/2
DT12:D.OP2/2 2.93 THR87:A.OG1/2
DT12:D.O4/2 3.06 GLN90:A.OE1/2
DA13:D.OP1/2 2.77 LYS132:A.N/2
DG14:D.OP1/2 2.53 TYR324:A.OH/2
DC15:D.OP1/2 2.7 ARG173:A.NH2/2
DC15:D.OP2/2 3.05 ARG292:A.NH2/2
DC15:D.OP2/2 2.41 TRP315:A.NE1/2
DT17:D.OP1/2 3.27 LYS201:A.O/2
DT17:D.OP2/2 3.09 LYS201:A.O/2
DA18:D.OP2/2 2.69 ARG121:B.NE/2
DA18:D.OP2/2 3.19 ARG121:B.NH2/2
DA20:D.OP2/2 3.06 ARG100:B.NH1/2
DA20:D.OP2/2 2.88 ARG106:B.NH1/2
DT21:D.OP1/2 3.27 ARG101:B.NE/2
DT21:D.OP1/2 2.87 ARG101:B.NH2/2
DT21:D.OP2/2 2.28 ARG100:B.NH2/2
DT22:D.OP1/2 2.89 ARG118:A.NH2/1
DT22:D.OP2/2 2.87 SER38:B.N/2
DT22:D.OP2/2 2.65 THR41:B.OG1/2
DT22:D.O4/2 2.84 GLN90:B.OE1/2
DT24:D.OP1/2 2.98 ALA175:B.N/2
DA25:D.OP1/2 2.67 SER287:B.OG/2
DA25:D.OP1/2 3.19 HIS289:B.N/2
DA25:D.OP2/2 2.76 GLU262:B.OE2/2
DA25:D.OP2/2 2.76 GLY288:B.N/2
DA25:D.O4'/2 3.17 ARG282:B.NH1/2
DA25:D.N3/2 3.36 ARG282:B.NH2/2
DC26:D.OP1/2 2.86 TYR283:B.N/2
DG27:D.N7/2 2.98 ARG259:B.NH2/2
DG27:D.O6/2 2.73 ARG259:B.NE/2
DT32:D.O2/2 2.93 ARG243:B.NH1/2
DT32:D.O2/2 3.13 ARG243:B.NH2/2
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Nucleic atom d_n2w water d_p2w Protein atom
DA4:C.OP2/1 2.75 40:C/1 3.31 GLN156:B.NE2/1
DA4:C.O3'/1 3.15 357:B/1 3.12 ARG241:B.NE/1
DA4:C.N3/1 2.85 36:C/1 3.18 ARG241:B.NH2/1
DA11:C.OP2/1 2.72 47:C/1 3.08 SER51:B.OG/1
DA11:C.OP2/1 2.82 361:B/1 2.71 HIS91:B.NE2/1
DA13:C.OP2/1 2.85 359:B/1 3.35 LYS86:B.N/1
DA13:C.OP2/1 2.85 359:B/1 2.79 GLU129:B.OE2/1
DA13:C.N7/1 2.58 37:C/1 2.88 LYS86:B.O/1
DA13:C.N6/1 3.06 37:C/1 2.88 LYS86:B.O/1
DC21:C.OP2/1 2.93 366:A/2 3.03 GLY93:A.O/2
DT24:C.OP2/1 2.6 355:A/2 2.86 HIS40:A.NE2/2
DA25:C.O5'/1 3.04 363:A/2 2.67 TYR283:A.OH/2
DC26:C.OP1/1 3.07 354:A/2 2.67 LYS276:A.NZ/2
DC26:C.OP1/1 3.07 354:A/2 2.98 LEU284:A.N/2
DC26:C.N4/1 2.54 349:A/2 2.85 GLU262:A.OE1/2
DA3:D.N3/1 2.9 47:D/1 2.99 LYS244:A.N/1
DA4:D.OP1/1 3 353:A/1 2.29 LYS244:A.O/1
DA4:D.O3'/1 3.24 351:A/1 2.94 ARG241:A.NE/1
DA4:D.N3/1 2.4 68:D/1 3.01 ARG241:A.NH2/1
DA11:D.OP2/1 2.45 56:D/1 3.37 HIS91:A.NE2/1
DC19:D.OP2/1 2.97 423:B/1 2.52 SER108:B.OG/1
DA23:D.OP1/1 3.27 427:B/1 2.55 ARG179:B.NH2/1
DA23:D.N7/1 3.04 355:B/1 2.72 HIS40:B.O/1
DA23:D.N6/1 2.95 355:B/1 2.72 HIS40:B.O/1
DC26:D.OP1/1 2.73 63:D/1 2.84 LYS276:B.NZ/1
DC26:D.OP1/1 2.73 63:D/1 3.33 LEU284:B.N/1
DC26:D.N4/1 2.94 35:D/1 3 GLU262:B.OE1/1
DT34:D.OP1/1 2.85 65:D/1 3.17 ASN245:B.OD1/1
DT34:D.O3'/1 2.85 64:D/1 3.45 ASN245:B.N/1
DA4:C.OP2/2 2.75 40:C/2 3.31 GLN156:B.NE2/2
DA4:C.O3'/2 3.15 357:B/2 3.12 ARG241:B.NE/2
DA4:C.N3/2 2.85 36:C/2 3.18 ARG241:B.NH2/2
DA11:C.OP2/2 2.72 47:C/2 3.08 SER51:B.OG/2
DA11:C.OP2/2 2.82 361:B/2 2.71 HIS91:B.NE2/2
DA13:C.OP2/2 2.85 359:B/2 3.35 LYS86:B.N/2
DA13:C.OP2/2 2.85 359:B/2 2.79 GLU129:B.OE2/2
DA13:C.N7/2 2.58 37:C/2 2.88 LYS86:B.O/2
DA13:C.N6/2 3.06 37:C/2 2.88 LYS86:B.O/2
DC21:C.OP2/2 2.93 366:A/1 3.03 GLY93:A.O/1
DT24:C.OP2/2 2.6 355:A/1 2.86 HIS40:A.NE2/1
DA25:C.O5'/2 3.04 363:A/1 2.67 TYR283:A.OH/1
DC26:C.OP1/2 3.07 354:A/1 2.67 LYS276:A.NZ/1
DC26:C.OP1/2 3.07 354:A/1 2.98 LEU284:A.N/1
DC26:C.N4/2 2.54 349:A/1 2.85 GLU262:A.OE1/1
DA3:D.N3/2 2.9 47:D/2 2.99 LYS244:A.N/2
DA4:D.OP1/2 3 353:A/2 2.29 LYS244:A.O/2
DA4:D.O3'/2 3.24 351:A/2 2.94 ARG241:A.NE/2
DA4:D.N3/2 2.4 68:D/2 3.01 ARG241:A.NH2/2
DA11:D.OP2/2 2.45 56:D/2 3.37 HIS91:A.NE2/2
DC19:D.OP2/2 2.97 423:B/2 2.52 SER108:B.OG/2
DA23:D.OP1/2 3.27 427:B/2 2.55 ARG179:B.NH2/2
DA23:D.N7/2 3.04 355:B/2 2.72 HIS40:B.O/2
DA23:D.N6/2 2.95 355:B/2 2.72 HIS40:B.O/2
DC26:D.OP1/2 2.73 63:D/2 2.84 LYS276:B.NZ/2
DC26:D.OP1/2 2.73 63:D/2 3.33 LEU284:B.N/2
DC26:D.N4/2 2.94 35:D/2 3 GLU262:B.OE1/2
DT34:D.OP1/2 2.85 65:D/2 3.17 ASN245:B.OD1/2
DT34:D.O3'/2 2.85 64:D/2 3.45 ASN245:B.N/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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