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Nucleic atom dist Protein atom
DA7:B.OP1/1 3.24 TRP412:A.NE1/1
DA7:B.OP2/1 2.54 TYR426:A.OH/1
DA7:B.O5'/1 2.78 TYR426:A.OH/1
DC8:B.OP2/1 3.05 THR411:A.N/1
DT10:B.OP1/1 3.38 LYS443:A.NZ/1
DT10:B.OP1/1 3.12 LYS587:A.NZ/1
DT10:B.O2/1 2.96 LYS532:A.NZ/1
DG12:B.N3/1 3.45 ARG364:A.NH2/1
DA13:B.O4'/1 3.42 ARG364:A.NH2/1
DT108:C.O5'/1 3.4 ASN745:A.ND2/1
DT109:C.OP2/1 2.54 THR747:A.OG1/1
DA113:C.OP2/1 3.11 GLU418:A.OE2/1
DA113:C.OP2/1 2.9 LYS425:A.NZ/1
DA114:C.OP1/1 2.89 ARG364:A.N/1
DA114:C.OP1/1 3.06 HIS367:A.ND1/1
DG115:C.OP1/1 2.84 THR501:A.OG1/1
DG115:C.OP1/1 3.49 ASP533:A.N/1
DT116:C.OP1/1 2.87 GLY490:A.N/1
DC117:C.OP1/1 2.89 LYS587:A.N/1
DC117:C.OP2/1 3.22 ASN574:A.ND2/1
DT118:C.OP1/1 3.19 GLN578:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG12:B.N2/1 3.45 1009:A/1 2.57 ARG364:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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