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Nucleic atom dist Protein atom
DC403:C.OP1/1 3.1 SER294:A.OG/1
DC403:C.OP2/1 3.03 GLN297:A.NE2/1
DG406:C.N7/1 2.79 GLY257:A.N/1
DC407:C.OP1/1 3.37 LYS234:A.NZ/1
DC407:C.N4/1 2.62 GLN237:A.O/1
DG408:C.O6/1 2.63 GLN237:A.N/1
DT410:C.O3'/1 2.91 GLN90:A.NE2/1
DA412:C.OP1/1 2.92 SER126:A.OG/1
DA425:D.OP2/1 2.84 ARG228:A.NE/1
DA425:D.OP2/1 2.87 ARG228:A.NH2/1
DA425:D.OP2/1 2.88 TYR242:A.OH/1
DG426:D.OP1/1 2.75 THR250:A.N/1
DG426:D.OP1/1 2.78 THR250:A.OG1/1
DG426:D.N7/1 2.87 ARG240:A.NH1/1
DG426:D.O6/1 2.83 ARG240:A.NH2/1
DG426:D.N2/1 3.09 ILE86:A.O/1
DG428:D.OP2/1 3.16 ALA253:A.N/1
DG428:D.OP2/1 2.79 TYR254:A.N/1
DG428:D.O6/1 2.8 GLY256:A.N/1
DC429:D.OP1/1 2.8 ARG97:A.NH2/1
DC429:D.OP2/1 3.15 ARG97:A.NH1/1
DC429:D.N4/1 3 TYR254:A.O/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA404:C.OP2/1 2.77 111:C/1 2.99 THR295:A.OG1/1
DT405:C.OP2/1 2.77 80:C/1 3.02 GLY257:A.O/1
DT405:C.O4/1 2.98 539:A/1 2.69 LYS261:A.NZ/1
DC407:C.O5'/1 3.02 469:A/1 2.75 GLU239:A.OE2/1
DG426:D.OP2/1 2.63 24:D/1 3.16 ARG240:A.NH1/1
DG426:D.OP2/1 2.63 24:D/1 2.69 TYR242:A.OH/1
DG426:D.OP2/1 2.92 373:A/1 2.63 THR250:A.O/1
DG428:D.OP1/1 2.55 165:D/1 2.69 ASN304:A.OD1/1
DG428:D.N7/1 2.74 331:A/1 2.55 SER252:A.OG/1
DC429:D.OP1/1 2.83 472:A/1 2.73 GLN82:A.O/1
DC429:D.OP1/1 2.83 472:A/1 2.78 LYS89:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
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