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Nucleic atom dist Protein atom
DT2:C.O2/1 2.69 LYS244:B.NZ/1
DC5:C.OP1/1 2.57 ARG159:B.NH1/1
DC5:C.OP1/1 2.91 VAL242:B.N/1
DC5:C.OP2/1 3.15 GLN156:B.NE2/1
DC5:C.OP2/1 2.99 ARG159:B.NH2/1
DT6:C.OP2/1 2.77 SER257:B.N/1
DT10:C.OP2/1 2.6 SER47:B.OG/1
DT10:C.OP2/1 2.63 ARG50:B.NH1/1
DA11:C.OP1/1 2.29 ARG81:B.NH2/1
DA11:C.N3/1 3.57 ARG282:B.NH2/1
DT12:C.OP2/1 2.84 ALA84:B.N/1
DT12:C.OP2/1 2.9 THR87:B.OG1/1
DA13:C.OP1/1 2.67 LYS132:B.N/1
DA13:C.OP1/1 3.06 LYS132:B.NZ/1
DA14:C.N7/1 2.31 LYS86:B.NZ/1
DA14:C.N3/1 2.52 LYS201:B.NZ/1
DT15:C.OP1/1 2.69 ARG173:B.NE/1
DT15:C.OP1/1 2.96 ARG173:B.NH2/1
DT15:C.OP2/1 2.8 TRP315:B.NE1/1
DT15:C.OP2/1 3.03 TYR324:B.OH/1
DT15:C.O5'/1 2.66 ARG173:B.NH2/1
DT15:C.O4'/1 3.27 LYS201:B.NZ/1
DG16:C.OP1/1 3.09 THR316:B.N/1
DG16:C.OP2/1 3.09 ASN317:B.N/1
DG16:C.O5'/1 2.29 THR316:B.OG1/1
DG16:C.O3'/1 3.17 THR316:B.OG1/1
DG20:C.OP2/1 3.28 ARG106:A.NH1/1
DT22:C.OP1/1 3.12 LYS122:B.NZ/1
DT22:C.OP2/1 3.21 SER38:A.N/1
DT22:C.OP2/1 2.52 THR41:A.OG1/1
DA23:C.O3'/1 2.87 ARG173:A.NE/1
DA25:C.OP1/1 2.64 HIS289:A.N/1
DA25:C.O4'/1 3.19 ARG282:A.NH2/1
DC26:C.OP1/1 2.41 TYR283:A.N/1
DT2:D.O2/1 2.32 LYS244:A.NZ/1
DC5:D.OP1/1 2.92 ARG159:A.NH1/1
DC5:D.OP1/1 3.11 VAL242:A.N/1
DT6:D.OP2/1 2.92 SER257:A.N/1
DT10:D.OP2/1 2.95 SER47:A.OG/1
DT10:D.OP2/1 3.34 ARG50:A.NE/1
DT10:D.OP2/1 2.36 ARG50:A.NH2/1
DA11:D.OP1/1 2.29 ARG81:A.NH2/1
DA11:D.OP2/1 3.24 HIS91:A.NE2/1
DT12:D.OP2/1 2.76 ALA84:A.N/1
DT12:D.O4/1 3.38 GLN90:A.NE2/1
DA13:D.OP1/1 2.9 LYS132:A.N/1
DG14:D.OP1/1 2.79 TYR324:A.OH/1
DG14:D.N7/1 3.14 LYS86:A.NZ/1
DT17:D.OP2/1 2.97 LYS201:A.O/1
DA18:D.OP2/1 2.28 ARG121:B.NE/1
DC19:D.O5'/1 3.43 ARG106:B.NH2/1
DA20:D.OP2/1 2.28 ARG106:B.NH1/1
DT21:D.OP1/1 3.01 ARG101:B.NH2/1
DT21:D.OP2/1 2.85 ARG100:B.NH1/1
DT22:D.OP1/1 3.31 ARG118:A.NH2/2
DT22:D.OP2/1 2.91 SER38:B.N/1
DT22:D.OP2/1 2.57 THR41:B.OG1/1
DT22:D.O4/1 2.94 GLN90:B.NE2/1
DA23:D.OP2/1 3.41 HIS40:B.ND1/1
DT24:D.OP1/1 2.78 ALA175:B.N/1
DA25:D.OP1/1 2.42 SER287:B.OG/1
DA25:D.OP1/1 3.27 HIS289:B.N/1
DA25:D.OP2/1 2.42 GLU262:B.OE2/1
DA25:D.OP2/1 2.84 GLY288:B.N/1
DA25:D.O4'/1 2.92 ARG282:B.NH1/1
DA25:D.N3/1 3.38 ARG282:B.NH2/1
DC26:D.OP1/1 2.7 TYR283:B.N/1
DT32:D.O2/1 2.8 ARG243:B.NH1/1
DT32:D.O2/1 3.18 ARG243:B.NH2/1
DT2:C.O2/2 2.69 LYS244:B.NZ/2
DC5:C.OP1/2 2.57 ARG159:B.NH1/2
DC5:C.OP1/2 2.91 VAL242:B.N/2
DC5:C.OP2/2 3.15 GLN156:B.NE2/2
DC5:C.OP2/2 2.99 ARG159:B.NH2/2
DT6:C.OP2/2 2.77 SER257:B.N/2
DT10:C.OP2/2 2.6 SER47:B.OG/2
DT10:C.OP2/2 2.63 ARG50:B.NH1/2
DA11:C.OP1/2 2.29 ARG81:B.NH2/2
DA11:C.N3/2 3.57 ARG282:B.NH2/2
DT12:C.OP2/2 2.84 ALA84:B.N/2
DT12:C.OP2/2 2.9 THR87:B.OG1/2
DA13:C.OP1/2 2.67 LYS132:B.N/2
DA13:C.OP1/2 3.06 LYS132:B.NZ/2
DA14:C.N7/2 2.31 LYS86:B.NZ/2
DA14:C.N3/2 2.52 LYS201:B.NZ/2
DT15:C.OP1/2 2.69 ARG173:B.NE/2
DT15:C.OP1/2 2.96 ARG173:B.NH2/2
DT15:C.OP2/2 2.8 TRP315:B.NE1/2
DT15:C.OP2/2 3.03 TYR324:B.OH/2
DT15:C.O5'/2 2.66 ARG173:B.NH2/2
DT15:C.O4'/2 3.27 LYS201:B.NZ/2
DG16:C.OP1/2 3.09 THR316:B.N/2
DG16:C.OP2/2 3.09 ASN317:B.N/2
DG16:C.O5'/2 2.29 THR316:B.OG1/2
DG16:C.O3'/2 3.17 THR316:B.OG1/2
DG20:C.OP2/2 3.28 ARG106:A.NH1/2
DT22:C.OP1/2 3.12 LYS122:B.NZ/2
DT22:C.OP2/2 3.21 SER38:A.N/2
DT22:C.OP2/2 2.52 THR41:A.OG1/2
DA23:C.O3'/2 2.87 ARG173:A.NE/2
DA25:C.OP1/2 2.64 HIS289:A.N/2
DA25:C.O4'/2 3.19 ARG282:A.NH2/2
DC26:C.OP1/2 2.41 TYR283:A.N/2
DT2:D.O2/2 2.32 LYS244:A.NZ/2
DC5:D.OP1/2 2.92 ARG159:A.NH1/2
DC5:D.OP1/2 3.11 VAL242:A.N/2
DT6:D.OP2/2 2.92 SER257:A.N/2
DT10:D.OP2/2 2.95 SER47:A.OG/2
DT10:D.OP2/2 3.34 ARG50:A.NE/2
DT10:D.OP2/2 2.36 ARG50:A.NH2/2
DA11:D.OP1/2 2.29 ARG81:A.NH2/2
DA11:D.OP2/2 3.24 HIS91:A.NE2/2
DT12:D.OP2/2 2.76 ALA84:A.N/2
DT12:D.O4/2 3.38 GLN90:A.NE2/2
DA13:D.OP1/2 2.9 LYS132:A.N/2
DG14:D.OP1/2 2.79 TYR324:A.OH/2
DG14:D.N7/2 3.14 LYS86:A.NZ/2
DT17:D.OP2/2 2.97 LYS201:A.O/2
DA18:D.OP2/2 2.28 ARG121:B.NE/2
DC19:D.O5'/2 3.43 ARG106:B.NH2/2
DA20:D.OP2/2 2.28 ARG106:B.NH1/2
DT21:D.OP1/2 3.01 ARG101:B.NH2/2
DT21:D.OP2/2 2.85 ARG100:B.NH1/2
DT22:D.OP1/2 3.31 ARG118:A.NH2/1
DT22:D.OP2/2 2.91 SER38:B.N/2
DT22:D.OP2/2 2.57 THR41:B.OG1/2
DT22:D.O4/2 2.94 GLN90:B.NE2/2
DA23:D.OP2/2 3.41 HIS40:B.ND1/2
DT24:D.OP1/2 2.78 ALA175:B.N/2
DA25:D.OP1/2 2.42 SER287:B.OG/2
DA25:D.OP1/2 3.27 HIS289:B.N/2
DA25:D.OP2/2 2.42 GLU262:B.OE2/2
DA25:D.OP2/2 2.84 GLY288:B.N/2
DA25:D.O4'/2 2.92 ARG282:B.NH1/2
DA25:D.N3/2 3.38 ARG282:B.NH2/2
DC26:D.OP1/2 2.7 TYR283:B.N/2
DT32:D.O2/2 2.8 ARG243:B.NH1/2
DT32:D.O2/2 3.18 ARG243:B.NH2/2
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Nucleic atom d_n2w water d_p2w Protein atom
DA3:C.N3/1 2.72 59:C/1 3.25 LYS244:B.N/1
DA4:C.OP1/1 2.89 46:C/1 2.97 ARG243:B.O/1
DA4:C.O3'/1 3.25 373:B/1 2.97 ARG241:B.NE/1
DA4:C.N3/1 2.7 39:C/1 2.88 ARG241:B.NH2/1
DA11:C.OP2/1 2.86 346:B/1 2.65 HIS91:B.NE2/1
DA23:C.N7/1 2.96 50:C/1 3.1 HIS40:A.O/1
DA23:C.N6/1 2.9 50:C/1 3.1 HIS40:A.O/1
DC26:C.N4/1 2.79 68:C/1 3.41 ARG259:A.NE/1
DA3:D.N3/1 3.11 41:D/1 3.21 LYS244:A.N/1
DA4:D.OP1/1 3 356:A/1 2.72 LYS244:A.O/1
DA13:D.O4'/1 3.11 346:A/1 2.88 ARG282:A.NH2/1
DA13:D.N6/1 2.97 382:A/1 2.43 LYS86:A.O/1
DC19:D.OP2/1 2.43 47:D/1 2.93 SER108:B.OG/1
DT21:D.OP2/1 3.12 437:B/1 2.82 ARG100:B.NH1/1
DA23:D.OP1/1 3.23 431:B/1 2.51 ARG179:B.NH2/1
DA23:D.OP2/1 3.17 446:B/1 3.04 ARG199:B.NH1/1
DA23:D.OP2/1 3.17 446:B/1 3.07 ARG199:B.NH2/1
DA23:D.N7/1 2.82 39:D/1 2.85 HIS40:B.O/1
DA23:D.N6/1 2.95 39:D/1 2.85 HIS40:B.O/1
DC26:D.N4/1 2.72 38:D/1 2.98 GLU262:B.OE1/1
DA28:D.N6/1 3.13 377:B/1 2.97 ARG259:B.NE/1
DA3:C.N3/2 2.72 59:C/2 3.25 LYS244:B.N/2
DA4:C.OP1/2 2.89 46:C/2 2.97 ARG243:B.O/2
DA4:C.O3'/2 3.25 373:B/2 2.97 ARG241:B.NE/2
DA4:C.N3/2 2.7 39:C/2 2.88 ARG241:B.NH2/2
DA11:C.OP2/2 2.86 346:B/2 2.65 HIS91:B.NE2/2
DA23:C.N7/2 2.96 50:C/2 3.1 HIS40:A.O/2
DA23:C.N6/2 2.9 50:C/2 3.1 HIS40:A.O/2
DC26:C.N4/2 2.79 68:C/2 3.41 ARG259:A.NE/2
DA3:D.N3/2 3.11 41:D/2 3.21 LYS244:A.N/2
DA4:D.OP1/2 3 356:A/2 2.72 LYS244:A.O/2
DA13:D.O4'/2 3.11 346:A/2 2.88 ARG282:A.NH2/2
DA13:D.N6/2 2.97 382:A/2 2.43 LYS86:A.O/2
DC19:D.OP2/2 2.43 47:D/2 2.93 SER108:B.OG/2
DT21:D.OP2/2 3.12 437:B/2 2.82 ARG100:B.NH1/2
DA23:D.OP1/2 3.23 431:B/2 2.51 ARG179:B.NH2/2
DA23:D.OP2/2 3.17 446:B/2 3.04 ARG199:B.NH1/2
DA23:D.OP2/2 3.17 446:B/2 3.07 ARG199:B.NH2/2
DA23:D.N7/2 2.82 39:D/2 2.85 HIS40:B.O/2
DA23:D.N6/2 2.95 39:D/2 2.85 HIS40:B.O/2
DC26:D.N4/2 2.72 38:D/2 2.98 GLU262:B.OE1/2
DA28:D.N6/2 3.13 377:B/2 2.97 ARG259:B.NE/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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