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Nucleic atom dist Protein atom
DT5:B.O2/1 3.11 ARG26:A.NH2/2
DG6:B.OP1/1 2.92 ARG27:A.NE/2
DG6:B.OP1/1 3.34 ARG27:A.NH2/2
DG6:B.OP1/1 2.86 ASN66:A.ND2/2
DT7:B.OP1/1 3.01 ARG30:A.NE/2
DT7:B.OP1/1 3.06 ARG30:A.NH2/2
DG8:B.OP2/1 2.85 ARG30:A.NH2/2
DG8:B.N7/1 2.92 ARG62:A.NH1/2
DG8:B.O6/1 2.96 ARG62:A.NH2/2
DT9:B.O4/1 3.13 ARG62:A.NH2/2
DT11:B.O4/1 2.85 LYS54:A.NZ/2
DA13:B.N6/1 2.95 SER438:A.O/1
DG14:B.OP2/1 3.02 ASN255:A.ND2/1
DG14:B.O5'/1 2.99 ASN255:A.ND2/1
DA15:B.N7/1 2.95 GLN243:A.NE2/1
DA15:B.N6/1 2.9 GLN243:A.OE1/1
DG16:B.OP1/1 2.66 GLN106:A.N/2
DG16:B.O6/1 2.95 GLY245:A.N/1
DT17:B.OP1/1 2.91 ARG342:A.NE/2
DC18:B.O2/1 3 LYS330:A.NZ/1
DA19:B.OP1/1 2.79 THR334:A.N/1
DA19:B.OP1/1 2.29 THR334:A.OG1/1
DG20:B.OP1/1 2.7 THR99:A.OG1/1
DG20:B.OP2/1 2.3 LYS333:A.NZ/1
DG20:B.O3'/1 2.95 GLU326:A.OE1/1
DG20:B.O3'/1 2.92 GLU326:A.OE2/1
DC1:C.OP1/1 3.01 ASP97:A.OD1/1
DC1:C.O3'/1 3.14 ARG322:A.NH2/1
DT2:C.OP1/1 2.8 ARG322:A.NE/1
DT2:C.OP1/1 3.16 ARG322:A.NH2/1
DT2:C.OP2/1 2.96 ARG210:A.NH1/1
DT2:C.OP2/1 2.75 TYR319:A.OH/1
DT2:C.O4'/1 3 TRP298:A.NE1/1
DT2:C.O4/1 2.69 TYR237:A.OH/1
DG3:C.N7/1 2.92 LYS244:A.NZ/1
DC5:C.OP1/1 3.09 ARG367:A.NH1/1
DT6:C.OP1/1 3.07 SER445:A.N/1
DT6:C.O4/1 3.13 LYS439:A.NZ/1
DC7:C.OP1/1 2.8 SER45:A.OG/2
DC7:C.N4/1 2.82 SER438:A.OG/1
DT8:C.OP1/1 2.82 ARG342:A.N/2
DT8:C.OP2/1 2.61 TYR61:A.OH/2
DT9:C.OP1/1 2.74 GLU344:A.N/2
DT9:C.OP1/1 3.21 ASN348:A.ND2/2
DA10:C.OP2/1 3.17 LYS345:A.NZ/2
DA10:C.N6/1 3.28 GLU58:A.OE2/2
DA17:C.N3/1 3.35 ARG26:A.NH1/2
DT5:B.O2/2 3.11 ARG26:A.NH2/1
DG6:B.OP1/2 2.92 ARG27:A.NE/1
DG6:B.OP1/2 3.34 ARG27:A.NH2/1
DG6:B.OP1/2 2.86 ASN66:A.ND2/1
DT7:B.OP1/2 3.01 ARG30:A.NE/1
DT7:B.OP1/2 3.06 ARG30:A.NH2/1
DG8:B.OP2/2 2.85 ARG30:A.NH2/1
DG8:B.N7/2 2.92 ARG62:A.NH1/1
DG8:B.O6/2 2.96 ARG62:A.NH2/1
DT9:B.O4/2 3.13 ARG62:A.NH2/1
DT11:B.O4/2 2.85 LYS54:A.NZ/1
DA13:B.N6/2 2.95 SER438:A.O/2
DG14:B.OP2/2 3.02 ASN255:A.ND2/2
DG14:B.O5'/2 2.99 ASN255:A.ND2/2
DA15:B.N7/2 2.95 GLN243:A.NE2/2
DA15:B.N6/2 2.9 GLN243:A.OE1/2
DG16:B.OP1/2 2.66 GLN106:A.N/1
DG16:B.O6/2 2.95 GLY245:A.N/2
DT17:B.OP1/2 2.91 ARG342:A.NE/1
DC18:B.O2/2 3 LYS330:A.NZ/2
DA19:B.OP1/2 2.8 THR334:A.N/2
DA19:B.OP1/2 2.29 THR334:A.OG1/2
DG20:B.OP1/2 2.71 THR99:A.OG1/2
DG20:B.OP2/2 2.3 LYS333:A.NZ/2
DG20:B.O3'/2 2.95 GLU326:A.OE1/2
DG20:B.O3'/2 2.92 GLU326:A.OE2/2
DC1:C.OP1/2 3.01 ASP97:A.OD1/2
DC1:C.O3'/2 3.14 ARG322:A.NH2/2
DT2:C.OP1/2 2.8 ARG322:A.NE/2
DT2:C.OP1/2 3.16 ARG322:A.NH2/2
DT2:C.OP2/2 2.96 ARG210:A.NH1/2
DT2:C.OP2/2 2.75 TYR319:A.OH/2
DT2:C.O4'/2 3 TRP298:A.NE1/2
DT2:C.O4/2 2.69 TYR237:A.OH/2
DG3:C.N7/2 2.92 LYS244:A.NZ/2
DC5:C.OP1/2 3.09 ARG367:A.NH1/2
DT6:C.OP1/2 3.07 SER445:A.N/2
DT6:C.O4/2 3.13 LYS439:A.NZ/2
DC7:C.OP1/2 2.8 SER45:A.OG/1
DC7:C.N4/2 2.82 SER438:A.OG/2
DT8:C.OP1/2 2.82 ARG342:A.N/1
DT8:C.OP2/2 2.61 TYR61:A.OH/1
DT9:C.OP1/2 2.74 GLU344:A.N/1
DT9:C.OP1/2 3.21 ASN348:A.ND2/1
DA10:C.OP2/2 3.17 LYS345:A.NZ/1
DA10:C.N6/2 3.28 GLU58:A.OE2/1
DA17:C.N3/2 3.35 ARG26:A.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG6:B.N3/1 2.78 615:A/2 2.79 ARG26:A.NH1/2
DT7:B.OP1/1 2.73 523:A/2 2.69 ARG26:A.O/2
DT7:B.OP2/1 2.63 23:B/1 2.83 GLY59:A.O/2
DT7:B.OP2/1 2.86 540:A/2 2.66 ARG62:A.NH1/2
DG8:B.OP2/1 2.7 29:B/1 3.01 ARG30:A.NH1/2
DG8:B.OP2/1 2.87 28:B/1 2.97 ALA55:A.O/2
DT9:B.OP2/1 2.8 585:A/2 2.91 ALA55:A.N/2
DT11:B.OP2/1 3.11 77:B/1 3.17 ARG440:A.NE/1
DT11:B.OP2/1 2.94 36:B/1 2.98 ARG440:A.NH2/1
DA13:B.N7/1 2.91 32:B/1 3 SER438:A.O/1
DG14:B.OP2/1 2.6 31:B/1 2.89 ALA258:A.N/1
DA15:B.OP2/1 2.69 37:B/1 3.16 ASN255:A.OD1/1
DG16:B.OP1/1 2.79 74:B/1 3.07 VAL107:A.N/2
DG20:B.O3'/1 2.8 21:B/1 3.24 ASP97:A.OD2/1
DG20:B.O3'/1 2.8 21:B/1 2.76 THR98:A.O/1
DG20:B.O3'/1 2.8 21:B/1 3.2 GLU326:A.OE1/1
DC1:C.OP1/1 2.98 485:A/1 2.87 ASP97:A.OD1/1
DC1:C.OP1/1 2.98 485:A/1 2.62 THR98:A.O/1
DT2:C.OP2/1 3.07 562:A/1 3.05 ARG189:A.N/1
DG3:C.OP1/1 2.66 31:C/1 3.2 ARG256:A.NH1/1
DG3:C.OP1/1 2.66 31:C/1 2.79 ARG256:A.NH2/1
DG3:C.N2/1 3.05 33:C/1 3.13 TRP323:A.NE1/1
DG3:C.N3/1 2.81 33:C/1 3.13 TRP323:A.NE1/1
DA4:C.N7/1 2.63 32:C/1 2.94 GLN243:A.O/1
DC5:C.OP1/1 2.68 902:A/1 2.35 GLU327:A.OE2/1
DC5:C.OP1/1 2.68 902:A/1 3.04 ARG367:A.NH2/1
DC5:C.OP2/1 2.89 664:A/1 2.87 THR441:A.OG1/1
DC5:C.N4/1 3.39 559:A/1 2.84 GLN243:A.O/1
DC5:C.N4/1 3.39 559:A/1 2.72 LYS439:A.NZ/1
DT6:C.OP2/1 2.62 22:C/1 2.88 SER438:A.N/1
DT6:C.OP2/1 2.62 22:C/1 2.68 SER438:A.OG/1
DC7:C.OP2/1 3.01 708:A/1 2.66 GLY434:A.O/1
DT8:C.OP1/1 2.74 491:A/2 2.83 ARG340:A.O/2
DT8:C.OP2/1 2.71 23:C/1 3.16 ILE46:A.N/2
DT8:C.OP2/1 2.71 23:C/1 2.94 GLN341:A.OE1/2
DT9:C.OP2/1 2.86 24:C/1 3.07 TYR61:A.O/2
DT9:C.OP2/1 2.86 24:C/1 2.76 ARG65:A.NH1/2
DA10:C.OP2/1 2.54 824:A/2 2.98 ASN348:A.ND2/2
DA10:C.N7/1 2.87 546:A/2 2.59 GLU58:A.OE2/2
DA10:C.N7/1 2.87 546:A/2 2.83 ARG65:A.NH1/2
DT11:C.O4/1 2.49 524:A/2 2.47 GLU58:A.OE2/2
DA12:C.N6/1 3.2 763:A/2 3.02 ARG62:A.NH2/2
DA16:C.N3/1 2.9 615:A/2 2.79 ARG26:A.NH1/2
DG6:B.N3/2 2.78 615:A/1 2.79 ARG26:A.NH1/1
DT7:B.OP1/2 2.73 523:A/1 2.69 ARG26:A.O/1
DT7:B.OP2/2 2.63 23:B/2 2.84 GLY59:A.O/1
DT7:B.OP2/2 2.86 540:A/1 2.66 ARG62:A.NH1/1
DG8:B.OP2/2 2.7 29:B/2 3.01 ARG30:A.NH1/1
DG8:B.OP2/2 2.87 28:B/2 2.97 ALA55:A.O/1
DT9:B.OP2/2 2.8 585:A/1 2.91 ALA55:A.N/1
DT11:B.OP2/2 3.11 77:B/2 3.17 ARG440:A.NE/2
DT11:B.OP2/2 2.94 36:B/2 2.98 ARG440:A.NH2/2
DA13:B.N7/2 2.91 32:B/2 3 SER438:A.O/2
DG14:B.OP2/2 2.6 31:B/2 2.89 ALA258:A.N/2
DA15:B.OP2/2 2.69 37:B/2 3.16 ASN255:A.OD1/2
DG16:B.OP1/2 2.79 74:B/2 3.07 VAL107:A.N/1
DG20:B.O3'/2 2.8 21:B/2 3.24 ASP97:A.OD2/2
DG20:B.O3'/2 2.8 21:B/2 2.76 THR98:A.O/2
DG20:B.O3'/2 2.8 21:B/2 3.2 GLU326:A.OE1/2
DC1:C.OP1/2 2.98 485:A/2 2.87 ASP97:A.OD1/2
DC1:C.OP1/2 2.98 485:A/2 2.63 THR98:A.O/2
DT2:C.OP2/2 3.07 562:A/2 3.05 ARG189:A.N/2
DG3:C.OP1/2 2.66 31:C/2 3.21 ARG256:A.NH1/2
DG3:C.OP1/2 2.66 31:C/2 2.79 ARG256:A.NH2/2
DG3:C.N2/2 3.05 33:C/2 3.13 TRP323:A.NE1/2
DG3:C.N3/2 2.81 33:C/2 3.13 TRP323:A.NE1/2
DA4:C.N7/2 2.63 32:C/2 2.94 GLN243:A.O/2
DC5:C.OP1/2 2.68 902:A/2 2.35 GLU327:A.OE2/2
DC5:C.OP1/2 2.68 902:A/2 3.04 ARG367:A.NH2/2
DC5:C.OP2/2 2.89 664:A/2 2.87 THR441:A.OG1/2
DC5:C.N4/2 3.39 559:A/2 2.84 GLN243:A.O/2
DC5:C.N4/2 3.39 559:A/2 2.72 LYS439:A.NZ/2
DT6:C.OP2/2 2.62 22:C/2 2.88 SER438:A.N/2
DT6:C.OP2/2 2.62 22:C/2 2.68 SER438:A.OG/2
DC7:C.OP2/2 3.01 708:A/2 2.66 GLY434:A.O/2
DT8:C.OP1/2 2.74 491:A/1 2.83 ARG340:A.O/1
DT8:C.OP2/2 2.71 23:C/2 3.16 ILE46:A.N/1
DT8:C.OP2/2 2.71 23:C/2 2.94 GLN341:A.OE1/1
DT9:C.OP2/2 2.86 24:C/2 3.07 TYR61:A.O/1
DT9:C.OP2/2 2.86 24:C/2 2.76 ARG65:A.NH1/1
DA10:C.OP2/2 2.54 824:A/1 2.98 ASN348:A.ND2/1
DA10:C.N7/2 2.87 546:A/1 2.59 GLU58:A.OE2/1
DA10:C.N7/2 2.87 546:A/1 2.83 ARG65:A.NH1/1
DT11:C.O4/2 2.49 524:A/1 2.47 GLU58:A.OE2/1
DA12:C.N6/2 3.2 763:A/1 3.02 ARG62:A.NH2/1
DA16:C.N3/2 2.9 615:A/1 2.79 ARG26:A.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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