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Nucleic atom dist Protein atom
DT4:S.OP1/1 3.36 LEU287:B.N/1
DT5:S.O3'/1 2.96 GLU114:B.OE1/1
DT5:S.O3'/1 3.06 VAL115:B.N/1
DT5:S.O3'/1 2.53 VAL115:B.O/1
DT5:S.O2/1 1.84 LYS119:B.NZ/1
DT5:S.O2/1 2.59 PHE120:B.N/1
DT5:S.N3/1 3.25 PHE120:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT3:S.O3'/1 2.52 96:S/1 2.85 LEU287:B.N/1
DT3:S.O2/1 2.84 126:S/1 3.14 LYS257:B.NZ/1
DT4:S.OP1/1 0.87 96:S/1 2.85 LEU287:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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