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Nucleic atom dist Protein atom
DA3:B.OP2/1 3.15 GLN170:A.NE2/1
DT4:B.OP2/1 2.89 ARG169:A.N/1
DT4:B.OP2/1 2.83 GLN170:A.N/1
DG5:B.OP2/1 2.71 ARG169:A.NH1/1
DG5:B.N7/1 3.3 ARG180:A.NH2/1
DC6:B.OP2/1 2.56 LYS188:A.NZ/1
DC6:B.N4/1 2.99 ASP181:A.OD1/1
DG7:B.O6/1 2.68 ARG185:A.NH2/1
DA8:B.N6/1 3.16 ARG185:A.NH2/1
DG10:C.OP1/1 2.68 VAL139:A.N/1
DA9:C.OP2/1 3.03 SER179:A.OG/1
DA9:C.OP2/1 2.45 THR182:A.OG1/1
DT1:C.O3'/1 2.78 LYS201:A.NZ/1
DT-1:C.OP1/1 2.84 LYS201:A.NZ/1
DA3:B.OP2/2 3.15 GLN170:A.NE2/2
DT4:B.OP2/2 2.89 ARG169:A.N/2
DT4:B.OP2/2 2.83 GLN170:A.N/2
DG5:B.OP2/2 2.71 ARG169:A.NH1/2
DG5:B.N7/2 3.3 ARG180:A.NH2/2
DC6:B.OP2/2 2.56 LYS188:A.NZ/2
DC6:B.N4/2 2.99 ASP181:A.OD1/2
DG7:B.O6/2 2.68 ARG185:A.NH2/2
DA8:B.N6/2 3.16 ARG185:A.NH2/2
DG10:C.OP1/2 2.68 VAL139:A.N/2
DA9:C.OP2/2 3.03 SER179:A.OG/2
DA9:C.OP2/2 2.45 THR182:A.OG1/2
DT1:C.O3'/2 2.78 LYS201:A.NZ/2
DT-1:C.OP1/2 2.84 LYS201:A.NZ/2
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Nucleic atom d_n2w water d_p2w Protein atom
DT-1:C.OP1/1 2.87 109:C/1 3.26 LYS201:A.NZ/1
DT-1:C.OP1/2 2.87 109:C/2 3.26 LYS201:A.NZ/2

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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