Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DT6:I.OP1/1 2.83 LYS637:E.N/1
DA7:I.O3'/1 3.32 ARG649:E.NH1/1
DA19:I.OP1/1 2.94 SER1253:D.N/1
DA19:I.OP1/1 3.05 SER1253:D.OG/1
DA29:I.OP1/1 2.75 ARG1230:D.NH1/1
DG31:I.OP1/1 2.75 ARG817:C.N/1
DG31:I.OP2/1 3.28 ARG817:C.NE/1
DT32:I.OP1/1 3.08 LYS815:C.N/1
DG40:I.OP1/1 3.16 THR1285:D.N/1
DG40:I.OP1/1 2.68 THR1285:D.OG1/1
DG40:I.OP2/1 3.3 SER1284:D.N/1
DA41:I.OP2/1 2.86 ARG1283:D.NH2/1
DC50:I.OP2/1 3.08 SER486:A.N/1
DA51:I.OP1/1 3.09 ARG472:A.NH1/1
DA51:I.OP1/1 2.83 PHE484:A.N/1
DA51:I.OP2/1 2.92 ARG472:A.NH2/1
DC60:I.OP1/1 2.73 ARG36:B.NH2/1
DC60:I.OP2/1 2.84 ARG36:B.NH1/1
DG70:I.OP1/1 2.85 VAL517:A.N/1
DG70:I.OP1/1 2.61 THR518:A.OG1/1
DT80:I.OP2/1 3.04 GLY248:F.N/1
DG81:I.OP1/1 2.59 ILE246:F.N/1
DG81:I.O3'/1 3.24 GLY644:E.N/1
DA82:I.OP1/1 2.93 GLY644:E.N/1
DA82:I.OP1/1 2.79 VAL646:E.N/1
DA82:I.OP1/1 2.76 ALA647:E.N/1
DA82:I.N3/1 3.36 ARG640:E.NH1/1
DA83:I.OP1/1 2.76 TYR641:E.N/1
DA83:I.O4'/1 2.78 ARG640:E.NH2/1
DT90:I.OP2/1 2.66 ARG669:E.NH2/1
DT90:I.O3'/1 2.54 ARG663:E.NH1/1
DT91:I.OP1/1 2.83 ARG663:E.NH1/1
DT91:I.OP1/1 2.68 LYS664:E.N/1
DT91:I.OP2/1 2.79 LEU665:E.N/1
DG100:I.OP2/1 3.33 LYS279:F.NZ/1
DC101:I.OP1/1 2.61 LYS279:F.N/1
DC101:I.OP1/1 2.8 THR280:F.N/1
DC101:I.OP1/1 2.63 THR280:F.OG1/1
DG103:I.OP1/1 2.44 SER1229:D.OG/1
DA111:I.OP1/1 2.86 ALA1045:G.N/1
DT112:I.OP1/1 2.74 ARG1035:G.NH1/1
DT112:I.OP1/1 2.93 VAL1043:G.N/1
DT112:I.OP2/1 2.73 ARG1035:G.NH2/1
DG122:I.OP1/1 3.25 ARG1029:G.NH1/1
DG122:I.OP1/1 3.11 ARG1029:G.NH2/1
DG122:I.OP1/1 3 SER1433:H.N/1
DG122:I.OP1/1 3.24 SER1433:H.O/1
DT123:I.OP1/1 3.34 LYS1431:H.N/1
DG131:I.O4'/1 2.87 ARG1077:G.NH2/1
DC132:I.OP1/1 3.31 THR1076:G.N/1
DC132:I.OP1/1 3.09 ARG1077:G.N/1
DC132:I.OP2/1 3.31 THR1076:G.N/1
DC132:I.OP2/1 3.03 THR1076:G.OG1/1
DA133:I.OP1/1 3.16 LYS1075:G.NZ/1
DG144:I.OP1/1 2.9 ARG442:A.N/1
DG144:I.OP1/1 2.95 THR445:A.OG1/1
DA151:J.OP1/1 2.35 LYS437:A.NZ/1
DA165:J.OP1/1 2.74 SER1453:H.N/1
DA165:J.OP2/1 3.14 SER1453:H.OG/1
DA176:J.OP2/1 2.64 ARG1032:G.NH1/1
DG177:J.OP1/1 3.13 ARG1017:G.N/1
DG177:J.OP2/1 2.98 ARG1017:G.NE/1
DG177:J.OP2/1 3 ARG1017:G.NH2/1
DT178:J.OP1/1 3.32 LYS1015:G.N/1
DT178:J.OP1/1 2.94 ARG1020:G.NH2/1
DG185:J.O4'/1 3.2 ARG1042:G.NH1/1
DG186:J.OP1/1 3.03 SER1484:H.N/1
DG186:J.OP1/1 2.91 THR1485:H.N/1
DG186:J.OP1/1 3.01 THR1485:H.OG1/1
DG186:J.OP2/1 2.86 SER1484:H.N/1
DG186:J.OP2/1 2.63 SER1484:H.OG/1
DA187:J.OP2/1 3.06 ARG1483:H.NH2/1
DC196:J.OP2/1 3.2 SER686:E.N/1
DA197:J.OP1/1 2.65 ARG672:E.NH1/1
DA197:J.OP1/1 3.02 PHE684:E.N/1
DA197:J.OP2/1 3.19 ARG672:E.NH2/1
DA207:J.OP1/1 2.64 ARG236:F.NH2/1
DA207:J.OP2/1 3.29 ARG236:F.NH1/1
DG217:J.OP1/1 2.74 VAL717:E.N/1
DG217:J.OP1/1 2.94 THR718:E.OG1/1
DG227:J.OP2/1 2.58 GLY48:B.N/1
DA228:J.OP1/1 2.61 ILE46:B.N/1
DA228:J.OP2/1 2.49 ARG35:B.NH2/1
DA229:J.OP1/1 2.99 GLY444:A.N/1
DA229:J.OP1/1 2.85 VAL446:A.N/1
DA229:J.OP1/1 3.02 ALA447:A.N/1
DA229:J.N3/1 2.69 ARG440:A.NH2/1
DC230:J.OP1/1 2.45 TYR441:A.N/1
DT237:J.OP2/1 2.69 ARG469:A.NH2/1
DT238:J.OP1/1 3.26 LYS464:A.N/1
DT238:J.OP2/1 2.93 LEU465:A.N/1
DG246:J.OP1/1 3.13 LYS79:B.NZ/1
DG246:J.OP2/1 3.29 LYS79:B.NZ/1
DC247:J.OP1/1 2.7 LYS79:B.N/1
DC247:J.OP1/1 2.55 THR80:B.OG1/1
DA257:J.OP1/1 3.14 ALA845:C.N/1
DT258:J.OP1/1 2.78 ARG835:C.NH1/1
DT258:J.OP1/1 3.32 VAL843:C.N/1
DT258:J.OP2/1 2.66 ARG835:C.NH2/1
DG268:J.OP1/1 2.77 ARG829:C.NH2/1
DG268:J.OP1/1 2.94 SER1233:D.N/1
DG268:J.OP1/1 3.19 SER1233:D.O/1
DT269:J.OP1/1 3.21 LYS1231:D.N/1
DC278:J.OP1/1 3.02 THR876:C.N/1
DC278:J.OP1/1 3.02 ARG877:C.N/1
DC278:J.OP2/1 3.1 THR876:C.N/1
DG290:J.OP1/1 2.82 ARG642:E.N/1
DG290:J.OP1/1 2.62 THR645:E.OG1/1
DA291:J.OP2/1 3.07 ARG642:E.NH2/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DC50:I.OP2/1 2.61 167:I/1 2.85 SER487:A.N/1
DG81:I.OP2/1 2.72 50:F/1 2.6 ILE246:F.O/1
DG81:I.OP2/1 2.72 50:F/1 2.77 TYR251:F.OH/1
DA197:J.OP2/1 2.68 300:J/1 2.98 ARG672:E.NH2/1
DA197:J.O5'/1 3.19 300:J/1 2.98 ARG672:E.NH2/1
DT208:J.OP2/1 2.72 10:F/1 2.69 LYS231:F.N/1
DC278:J.OP1/1 3.01 130:C/1 2.83 ARG877:C.O/1
DC278:J.OP1/1 3.01 130:C/1 3.26 ARG877:C.NH1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text