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Nucleic atom dist Protein atom
DA19:I.OP1/1 2.83 SER1253:D.N/1
DG31:I.OP1/1 2.74 ARG817:C.N/1
DG31:I.OP2/1 3.06 ARG817:C.NE/1
DG39:I.OP1/1 3.44 ARG842:C.NH2/1
DG40:I.OP1/1 2.95 THR1285:D.N/1
DG40:I.OP1/1 2.61 THR1285:D.OG1/1
DG40:I.OP2/1 3.33 SER1284:D.N/1
DA41:I.OP2/1 3.26 LYS77:B.NZ/1
DC50:I.OP2/1 3.2 SER486:A.N/1
DA51:I.OP1/1 2.92 ARG472:A.NH1/1
DA51:I.OP1/1 2.94 PHE484:A.N/1
DA51:I.OP2/1 3 ARG472:A.NH2/1
DC60:I.OP1/1 3.19 ARG463:A.NH1/1
DC60:I.OP1/1 3.28 ARG36:B.NH2/1
DG70:I.OP1/1 3.11 VAL517:A.N/1
DG70:I.OP1/1 2.57 THR518:A.OG1/1
DT80:I.OP2/1 2.71 GLY248:F.N/1
DG81:I.OP1/1 2.71 ILE246:F.N/1
DG81:I.OP2/1 2.84 ARG235:F.NH1/1
DG81:I.O3'/1 3.25 GLY644:E.N/1
DA82:I.OP1/1 2.89 GLY644:E.N/1
DA82:I.OP1/1 2.89 VAL646:E.N/1
DA82:I.OP1/1 2.81 ALA647:E.N/1
DA82:I.N3/1 3.35 ARG640:E.NH1/1
DA83:I.OP1/1 2.56 TYR641:E.N/1
DA83:I.O4'/1 2.98 ARG640:E.NH2/1
DT90:I.OP2/1 2.51 ARG669:E.NH2/1
DT91:I.OP1/1 2.62 ARG663:E.NH1/1
DT91:I.OP1/1 2.73 LYS664:E.N/1
DT91:I.OP2/1 2.88 LEU665:E.N/1
DC101:I.OP1/1 2.77 LYS279:F.N/1
DC101:I.OP1/1 2.65 THR280:F.N/1
DC101:I.OP1/1 2.99 THR280:F.OG1/1
DA111:I.OP1/1 2.98 ALA1045:G.N/1
DT112:I.OP1/1 2.71 ARG1035:G.NH1/1
DT112:I.OP1/1 3.18 VAL1043:G.N/1
DT112:I.OP2/1 2.54 ARG1035:G.NH2/1
DG122:I.OP1/1 3.08 ARG1029:G.NH2/1
DG122:I.OP1/1 3.25 SER1433:H.N/1
DT123:I.OP1/1 2.92 LYS1431:H.N/1
DG131:I.O4'/1 2.89 ARG1077:G.NH2/1
DC132:I.OP1/1 3.01 ARG1077:G.N/1
DC132:I.OP2/1 3.05 THR1076:G.N/1
DC132:I.OP2/1 3.07 THR1076:G.OG1/1
DA133:I.OP1/1 3.09 LYS1075:G.NZ/1
DG144:I.OP1/1 3.04 ARG442:A.N/1
DG144:I.OP1/1 2.8 THR445:A.OG1/1
DA165:J.OP1/1 2.89 SER1453:H.N/1
DA165:J.OP2/1 2.93 SER1453:H.OG/1
DG177:J.OP1/1 2.99 ARG1017:G.N/1
DT178:J.OP1/1 3.33 LYS1015:G.N/1
DG186:J.OP1/1 3.13 THR1485:H.N/1
DG186:J.OP2/1 3.13 SER1484:H.N/1
DC196:J.OP2/1 3.13 SER686:E.N/1
DA197:J.OP1/1 3.02 ARG672:E.NH1/1
DA197:J.OP1/1 3 PHE684:E.N/1
DA197:J.OP2/1 3.13 ARG672:E.NH2/1
DC199:J.OP2/1 2.66 LYS216:F.N/1
DA207:J.OP1/1 2.93 ARG236:F.NH2/1
DA207:J.OP2/1 3.15 ARG236:F.NH1/1
DC215:J.OP1/1 3.01 ARG642:E.NE/1
DC215:J.OP1/1 2.65 ARG642:E.NH2/1
DG217:J.OP1/1 2.98 VAL717:E.N/1
DG217:J.OP1/1 2.9 THR718:E.N/1
DG217:J.OP1/1 2.59 THR718:E.OG1/1
DG227:J.OP2/1 3.04 GLY48:B.N/1
DA228:J.OP1/1 2.59 ILE46:B.N/1
DA228:J.OP2/1 2.63 ARG35:B.NH2/1
DA228:J.O3'/1 3.19 GLY444:A.N/1
DA229:J.OP1/1 3 GLY444:A.N/1
DA229:J.OP1/1 2.8 VAL446:A.N/1
DA229:J.OP1/1 3.01 ALA447:A.N/1
DA229:J.N3/1 2.79 ARG440:A.NH2/1
DC230:J.OP1/1 2.84 TYR441:A.N/1
DT237:J.OP1/1 2.6 ARG469:A.NH2/1
DT238:J.OP1/1 3.06 LYS464:A.N/1
DT238:J.OP2/1 2.91 LEU465:A.N/1
DC247:J.OP1/1 2.72 LYS79:B.N/1
DA257:J.OP1/1 3.2 ALA845:C.N/1
DT258:J.OP2/1 3.3 ARG835:C.NH1/1
DT258:J.OP2/1 3.32 ARG835:C.NH2/1
DG268:J.OP1/1 2.5 ARG829:C.NH2/1
DG268:J.OP1/1 2.98 SER1233:D.N/1
DG268:J.OP1/1 3.18 SER1233:D.O/1
DT269:J.OP1/1 3.14 LYS1231:D.N/1
DC278:J.OP1/1 2.87 THR876:C.N/1
DC278:J.OP1/1 2.83 ARG877:C.N/1
DC278:J.OP2/1 3.27 THR876:C.N/1
DG290:J.OP1/1 2.88 ARG642:E.N/1
DG290:J.OP1/1 2.6 THR645:E.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA19:I.OP1/1 2.74 158:I/1 3.22 SER1253:D.OG/1
DA19:I.OP1/1 2.74 158:I/1 3.2 LYS1254:D.N/1
DG31:I.OP1/1 3.25 103:C/1 2.81 SER818:C.OG/1
DC50:I.OP2/1 2.91 26:A/1 2.57 SER487:A.N/1
DG81:I.OP2/1 3.06 303:F/1 2.57 ILE246:F.O/1
DG81:I.OP2/1 3.06 303:F/1 2.52 TYR251:F.OH/1
DG122:I.OP2/1 2.86 43:H/1 2.79 SER1433:H.O/1
DG122:I.OP2/1 2.86 43:H/1 3.42 ILE1436:H.N/1
DA165:J.OP1/1 2.65 319:J/1 3.1 LYS1454:H.N/1
DC196:J.OP2/1 3.16 185:E/1 3 SER687:E.N/1
DA207:J.OP1/1 2.98 313:F/1 2.48 THR230:F.OG1/1
DT208:J.OP2/1 2.79 295:J/1 2.87 LYS231:F.N/1
DG216:J.OP1/1 3.25 318:F/1 3.05 LYS244:F.NZ/1
DT238:J.OP1/1 2.67 311:J/1 3.5 LYS464:A.N/1
DC278:J.OP1/1 2.68 176:C/1 2.44 ARG877:C.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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