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Nucleic atom dist Protein atom
DT2:C.O2/1 2.68 LYS244:B.NZ/1
DC5:C.OP1/1 2.49 ARG159:B.NH1/1
DC5:C.OP1/1 2.87 VAL242:B.N/1
DC5:C.OP2/1 2.97 GLN156:B.NE2/1
DC5:C.OP2/1 2.9 ARG159:B.NH2/1
DT6:C.OP2/1 3.16 SER257:B.N/1
DC7:C.N4/1 2.95 SER259:B.OG/1
DT10:C.OP2/1 2.59 SER47:B.OG/1
DT10:C.OP2/1 2.49 ARG50:B.NH1/1
DA11:C.OP1/1 2.37 ARG81:B.NH2/1
DA11:C.N3/1 2.69 ARG282:B.NH2/1
DT12:C.OP2/1 2.77 ALA84:B.N/1
DT12:C.OP2/1 2.57 THR87:B.OG1/1
DT12:C.O4/1 3 GLN90:B.OE1/1
DA13:C.OP1/1 2.89 LYS132:B.N/1
DA14:C.OP1/1 2.8 TYR324:B.OH/1
DA14:C.N7/1 2.64 LYS86:B.NZ/1
DA14:C.N3/1 2.27 LYS201:B.NZ/1
DT15:C.OP1/1 2.81 ARG173:B.NE/1
DT15:C.OP1/1 3.43 HIS289:B.NE2/1
DT15:C.OP2/1 3.21 ARG292:B.NH2/1
DT15:C.OP2/1 2.96 TRP315:B.NE1/1
DT15:C.O4'/1 3.18 LYS201:B.NZ/1
DG16:C.OP1/1 2.66 THR316:B.N/1
DG16:C.OP1/1 3.06 THR316:B.OG1/1
DG16:C.OP1/1 2.43 THR316:B.N/1
DG16:C.OP1/1 2.61 THR316:B.OG1/1
DC21:C.O3'/1 3.33 ARG118:B.NH2/2
DT22:C.OP1/1 2.81 LYS122:B.NZ/2
DT22:C.OP2/1 3.18 SER38:A.N/2
DT22:C.OP2/1 2.39 THR41:A.OG1/2
DT22:C.O4/1 2.73 GLN90:A.OE1/2
DA25:C.O4'/1 3.03 ARG282:A.NH1/2
DA25:C.N3/1 2.89 ARG282:A.NH2/2
DT26:C.OP1/1 2.61 TYR283:A.N/2
DT2:D.O2/1 2.35 LYS244:A.NZ/1
DC5:D.OP1/1 2.56 ARG159:A.NH1/1
DC5:D.OP1/1 2.56 VAL242:A.N/1
DC5:D.OP2/1 3.43 ARG159:A.NH2/1
DT6:D.OP2/1 2.82 SER257:A.N/1
DT6:D.OP2/1 2.46 SER257:A.OG/1
DC7:D.N4/1 3.18 SER259:A.OG/1
DT10:D.OP2/1 2.77 SER47:A.OG/1
DT10:D.OP2/1 2.81 ARG50:A.NH2/1
DA11:D.OP1/1 2.72 ARG81:A.NH1/1
DA11:D.OP1/1 2.62 ARG81:A.NH2/1
DA11:D.N3/1 2.46 ARG282:A.NH2/1
DT12:D.OP2/1 2.8 ALA84:A.N/1
DT12:D.O4/1 3.01 GLN90:A.OE1/1
DA13:D.OP1/1 2.76 LYS132:A.N/1
DG14:D.OP1/1 2.78 TYR324:A.OH/1
DC15:D.OP1/1 2.89 ARG173:A.NH2/1
DC15:D.OP2/1 2.75 TRP315:A.NE1/1
DA18:D.OP2/1 2.48 ARG121:B.NE/1
DA18:D.OP2/1 2.55 ARG121:B.NH2/1
DA20:D.OP2/1 2.79 ARG106:B.NH1/1
DT21:D.OP1/1 3.3 ARG101:B.NE/1
DT21:D.OP1/1 2.88 ARG101:B.NH2/1
DT21:D.OP2/1 2.89 ARG100:B.NH1/1
DT21:D.OP2/1 2.83 ARG100:B.NH2/1
DT22:D.OP1/1 2.82 ARG118:A.NH2/2
DT22:D.OP2/1 2.96 SER38:B.N/1
DT22:D.OP2/1 2.33 THR41:B.OG1/1
DT22:D.O4/1 2.89 GLN90:B.OE1/1
DT24:D.OP1/1 2.8 ALA175:B.N/1
DT24:D.OP2/1 2.96 ASN258:B.ND2/1
DT24:D.O4/1 3.14 LYS43:B.NZ/1
DA25:D.OP1/1 2.64 SER287:B.OG/1
DA25:D.OP1/1 3.17 HIS289:B.N/1
DA25:D.OP2/1 2.81 GLY288:B.N/1
DA25:D.N3/1 3.12 ARG282:B.NH2/1
DT26:D.OP1/1 2.94 TYR283:B.N/1
DT32:D.O2/1 2.68 ARG243:B.NH1/1
DT2:C.O2/2 2.68 LYS244:B.NZ/2
DC5:C.OP1/2 2.49 ARG159:B.NH1/2
DC5:C.OP1/2 2.87 VAL242:B.N/2
DC5:C.OP2/2 2.97 GLN156:B.NE2/2
DC5:C.OP2/2 2.9 ARG159:B.NH2/2
DT6:C.OP2/2 3.16 SER257:B.N/2
DC7:C.N4/2 2.95 SER259:B.OG/2
DT10:C.OP2/2 2.59 SER47:B.OG/2
DT10:C.OP2/2 2.49 ARG50:B.NH1/2
DA11:C.OP1/2 2.37 ARG81:B.NH2/2
DA11:C.N3/2 2.69 ARG282:B.NH2/2
DT12:C.OP2/2 2.77 ALA84:B.N/2
DT12:C.OP2/2 2.57 THR87:B.OG1/2
DT12:C.O4/2 3 GLN90:B.OE1/2
DA13:C.OP1/2 2.89 LYS132:B.N/2
DA14:C.OP1/2 2.8 TYR324:B.OH/2
DA14:C.N7/2 2.64 LYS86:B.NZ/2
DA14:C.N3/2 2.27 LYS201:B.NZ/2
DT15:C.OP1/2 2.81 ARG173:B.NE/2
DT15:C.OP1/2 3.43 HIS289:B.NE2/2
DT15:C.OP2/2 3.21 ARG292:B.NH2/2
DT15:C.OP2/2 2.96 TRP315:B.NE1/2
DT15:C.O4'/2 3.18 LYS201:B.NZ/2
DG16:C.OP1/2 2.66 THR316:B.N/2
DG16:C.OP1/2 3.06 THR316:B.OG1/2
DG16:C.OP1/2 2.43 THR316:B.N/2
DG16:C.OP1/2 2.61 THR316:B.OG1/2
DC21:C.O3'/2 3.33 ARG118:B.NH2/1
DT22:C.OP1/2 2.81 LYS122:B.NZ/1
DT22:C.OP2/2 3.18 SER38:A.N/1
DT22:C.OP2/2 2.39 THR41:A.OG1/1
DT22:C.O4/2 2.73 GLN90:A.OE1/1
DA25:C.O4'/2 3.03 ARG282:A.NH1/1
DA25:C.N3/2 2.89 ARG282:A.NH2/1
DT26:C.OP1/2 2.61 TYR283:A.N/1
DT2:D.O2/2 2.35 LYS244:A.NZ/2
DC5:D.OP1/2 2.56 ARG159:A.NH1/2
DC5:D.OP1/2 2.56 VAL242:A.N/2
DC5:D.OP2/2 3.43 ARG159:A.NH2/2
DT6:D.OP2/2 2.82 SER257:A.N/2
DT6:D.OP2/2 2.46 SER257:A.OG/2
DC7:D.N4/2 3.18 SER259:A.OG/2
DT10:D.OP2/2 2.77 SER47:A.OG/2
DT10:D.OP2/2 2.81 ARG50:A.NH2/2
DA11:D.OP1/2 2.72 ARG81:A.NH1/2
DA11:D.OP1/2 2.62 ARG81:A.NH2/2
DA11:D.N3/2 2.46 ARG282:A.NH2/2
DT12:D.OP2/2 2.8 ALA84:A.N/2
DT12:D.O4/2 3.01 GLN90:A.OE1/2
DA13:D.OP1/2 2.76 LYS132:A.N/2
DG14:D.OP1/2 2.78 TYR324:A.OH/2
DC15:D.OP1/2 2.89 ARG173:A.NH2/2
DC15:D.OP2/2 2.75 TRP315:A.NE1/2
DA18:D.OP2/2 2.48 ARG121:B.NE/2
DA18:D.OP2/2 2.55 ARG121:B.NH2/2
DA20:D.OP2/2 2.79 ARG106:B.NH1/2
DT21:D.OP1/2 3.3 ARG101:B.NE/2
DT21:D.OP1/2 2.88 ARG101:B.NH2/2
DT21:D.OP2/2 2.89 ARG100:B.NH1/2
DT21:D.OP2/2 2.83 ARG100:B.NH2/2
DT22:D.OP1/2 2.82 ARG118:A.NH2/1
DT22:D.OP2/2 2.96 SER38:B.N/2
DT22:D.OP2/2 2.33 THR41:B.OG1/2
DT22:D.O4/2 2.89 GLN90:B.OE1/2
DT24:D.OP1/2 2.8 ALA175:B.N/2
DT24:D.OP2/2 2.96 ASN258:B.ND2/2
DT24:D.O4/2 3.14 LYS43:B.NZ/2
DA25:D.OP1/2 2.64 SER287:B.OG/2
DA25:D.OP1/2 3.17 HIS289:B.N/2
DA25:D.OP2/2 2.81 GLY288:B.N/2
DA25:D.N3/2 3.12 ARG282:B.NH2/2
DT26:D.OP1/2 2.94 TYR283:B.N/2
DT32:D.O2/2 2.68 ARG243:B.NH1/2
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Nucleic atom d_n2w water d_p2w Protein atom
DA4:C.N3/1 2.39 36:C/1 2.96 ARG241:B.NH2/1
DA14:C.OP2/1 2.67 38:C/1 2.85 LYS132:B.O/1
DA4:D.O3'/1 2.86 345:A/1 2.76 ARG241:A.NE/1
DT26:D.OP2/1 2.7 228:D/1 3.08 TRP286:B.O/1
DA4:C.N3/2 2.39 36:C/2 2.96 ARG241:B.NH2/2
DA14:C.OP2/2 2.67 38:C/2 2.85 LYS132:B.O/2
DA4:D.O3'/2 2.86 345:A/2 2.76 ARG241:A.NE/2
DT26:D.OP2/2 2.7 228:D/2 3.08 TRP286:B.O/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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