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Nucleic atom dist Protein atom
DG3:C.OP2/1 3.1 LYS111:A.N/1
DA4:C.OP2/1 2.76 TYR113:A.N/1
DG5:C.OP1/1 3.27 ARG130:A.NH2/1
DG5:C.OP1/1 2.68 ALA170:A.O/1
DG5:C.OP2/1 2.96 TYR113:A.OH/1
DG5:C.O6/1 3.01 LYS122:A.NZ/1
DG6:C.OP1/1 3.11 ARG130:A.NH1/1
DG6:C.OP1/1 2.6 ALA175:A.N/1
DG6:C.OP2/1 2.81 ARG130:A.NH2/1
DG6:C.N7/1 3.2 LYS126:A.NZ/1
DT11:C.OP1/1 2.76 GLN254:B.OE1/1
DT11:C.OP2/1 2.88 ARG227:B.NH2/1
DG12:C.OP1/1 2.93 ARG250:B.NE/1
DG12:C.OP1/1 2.91 ARG250:B.NH2/1
DG12:C.OP2/1 2.84 ARG257:B.NH1/1
DG12:C.OP2/1 2.61 ARG257:B.NH2/1
DG12:C.N7/1 3.03 ARG227:B.NH1/1
DC14:C.N4/1 2.82 GLU219:B.OE1/1
DG21:D.OP2/1 3.05 TYR211:B.N/1
DA22:D.OP1/1 3.27 TYR213:B.N/1
DA22:D.OP2/1 3.25 TYR213:B.N/1
DG23:D.OP2/1 2.85 VAL272:B.N/1
DG23:D.O6/1 2.62 LYS222:B.NZ/1
DT29:D.OP1/1 2.75 GLN154:A.NE2/1
DT29:D.OP2/1 3.21 ARG127:A.NE/1
DT29:D.OP2/1 3.28 ARG127:A.NH2/1
DG30:D.OP1/1 2.97 ARG150:A.NE/1
DG30:D.OP1/1 2.71 ARG150:A.NH2/1
DG30:D.OP1/1 3.24 ASN151:A.ND2/1
DG30:D.OP2/1 3.01 ARG157:A.NH1/1
DG30:D.OP2/1 2.87 ARG157:A.NH2/1
DG30:D.N7/1 2.98 ARG127:A.NH1/1
DA31:D.OP1/1 3.2 LYS252:B.NZ/1
DC32:D.N4/1 3.43 GLU119:A.OE1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA4:C.OP2/1 2.58 23:C/1 2.59 HIS112:A.ND1/1
DA4:C.N7/1 2.88 192:A/1 2.81 LYS122:A.NZ/1
DG12:C.OP2/1 3.09 83:B/1 2.79 GLY220:B.O/1
DG12:C.OP2/1 3.09 83:B/1 2.75 ARG227:B.NH2/1
DA13:C.N7/1 2.95 17:B/1 2.54 GLU219:B.O/1
DA22:D.OP1/1 2.92 63:B/1 2.83 ASN214:B.N/1
DG30:D.OP2/1 2.81 198:A/1 3.04 GLY120:A.O/1
DG30:D.OP2/1 2.81 198:A/1 2.69 ARG127:A.NH2/1
DA31:D.OP1/1 2.54 51:D/1 2.93 ASP106:A.OD2/1
DA31:D.OP1/1 2.54 51:D/1 3.31 ARG150:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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