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Nucleic atom dist Protein atom
DC-9:B.OP1/1 2.84 GLY9:A.N/1
DC-8:B.OP1/1 2.93 ARG43:A.N/1
DC-8:B.OP1/1 2.8 ARG43:A.NH1/1
DC-8:B.OP2/1 2.94 ARG23:A.NE/1
DC-8:B.OP2/1 3.16 ARG23:A.NH2/1
DT-7:B.OP2/1 3.19 ARG43:A.NH1/1
DT-7:B.OP2/1 2.94 ARG43:A.NH2/1
DA2:B.OP1/1 3.21 LEU66:A.N/2
DG3:B.OP1/1 3.41 LYS60:A.NZ/2
DG3:B.OP2/1 2.64 TYR25:A.OH/2
DG4:B.OP2/1 2.67 SER18:A.OG/2
DG5:B.O6/1 2.91 LYS20:A.NZ/2
DC-9:B.OP1/2 2.84 GLY9:A.N/2
DC-8:B.OP1/2 2.93 ARG43:A.N/2
DC-8:B.OP1/2 2.8 ARG43:A.NH1/2
DC-8:B.OP2/2 2.94 ARG23:A.NE/2
DC-8:B.OP2/2 3.16 ARG23:A.NH2/2
DT-7:B.OP2/2 3.19 ARG43:A.NH1/2
DT-7:B.OP2/2 2.94 ARG43:A.NH2/2
DA2:B.OP1/2 3.21 LEU66:A.N/1
DG3:B.OP1/2 3.41 LYS60:A.NZ/1
DG3:B.OP2/2 2.64 TYR25:A.OH/1
DG4:B.OP2/2 2.67 SER18:A.OG/1
DG5:B.O6/2 2.91 LYS20:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT-7:B.OP1/1 2.87 207:B/1 2.92 SER41:A.O/1
DA2:B.OP2/1 2.59 215:B/1 2.84 GLU67:A.N/2
DC12:B.OP1/1 3.18 479:A/2 2.84 ASP37:A.OD1/2
DC12:B.OP1/1 3.18 479:A/2 2.64 THR40:A.OG1/2
DC12:B.OP1/1 3.18 479:A/2 2.75 TYR44:A.OH/2
DT-7:B.OP1/2 2.87 207:B/2 2.92 SER41:A.O/2
DA2:B.OP2/2 2.59 215:B/2 2.84 GLU67:A.N/1
DC12:B.OP1/2 3.18 479:A/1 2.84 ASP37:A.OD1/1
DC12:B.OP1/2 3.18 479:A/1 2.64 THR40:A.OG1/1
DC12:B.OP1/2 3.18 479:A/1 2.75 TYR44:A.OH/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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