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Nucleic atom dist Protein atom
DA3:C.OP2/1 3.3 GLN170:A.NE2/1
DA3:C.O5'/1 2.85 GLN170:A.NE2/1
DT4:C.OP1/1 2.6 THR168:A.OG1/1
DT4:C.OP1/1 2.74 ARG169:A.N/1
DT4:C.OP2/1 2.9 GLN170:A.N/1
DG5:C.OP1/1 2.84 ARG169:A.NH1/1
DG5:C.N7/1 2.66 ARG180:A.NH1/1
DG5:C.O6/1 3.12 ARG180:A.NH1/1
DG5:C.O6/1 3.07 ARG180:A.NH2/1
DG7:C.N7/1 2.9 ARG185:A.NH1/1
DG13:D.OP1/1 2.71 VAL139:B.N/1
DA14:D.OP1/1 2.8 SER179:B.N/1
DA14:D.OP2/1 3.25 SER179:B.N/1
DA14:D.OP2/1 2.6 SER179:B.OG/1
DA14:D.OP2/1 2.5 THR182:B.OG1/1
DA14:D.N7/1 3.15 ARG185:B.NH1/1
DA14:D.N6/1 3.45 ARG185:B.NH2/1
DC16:D.N4/1 2.97 GLU181:B.OE1/1
DT23:D.OP1/1 3.13 HIS199:B.O/1
DT19:E.OP1/1 2.72 ARG169:B.N/1
DT19:E.O3'/1 3.25 ARG169:B.NH1/1
DG18:E.OP1/1 2.85 ARG169:B.NH1/1
DG18:E.N7/1 2.54 ARG180:B.NH1/1
DG18:E.O6/1 3.18 ARG180:B.NH1/1
DG18:E.O6/1 2.95 ARG180:B.NH2/1
DG10:F.OP1/1 3.45 VAL139:A.N/1
DA9:F.OP1/1 2.85 SER179:A.N/1
DA9:F.OP2/1 2.62 SER179:A.OG/1
DA9:F.OP2/1 2.7 THR182:A.OG1/1
DC7:F.N4/1 2.73 GLU181:A.OE1/1
DC-3:F.OP1/1 2.85 LYS26:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG5:C.OP1/1 2.85 653:A/1 2.82 ARG169:A.NH1/1
DG5:C.OP1/1 2.85 653:A/1 2.19 GLY184:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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