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Nucleic atom dist Protein atom
DA1806:E.OP1/1 3.23 THR301:B.OG1/1
DA1806:E.OP2/1 3.19 LYS339:B.NZ/1
DA1807:E.OP2/1 2.83 GLY299:B.N/1
DG1808:E.OP1/1 3.29 ARG298:B.NH1/1
DG1808:E.OP2/1 2.88 SER297:B.N/1
DC1811:E.OP1/1 2.8 GLY187:B.N/1
DC1811:E.OP1/1 2.8 THR190:B.N/1
DC1811:E.OP1/1 2.49 THR190:B.OG1/1
DC1811:E.OP2/1 3.18 ILE189:B.N/1
DT1812:E.OP1/1 2.88 GLY185:B.N/1
DC1813:E.OP1/1 2.72 GLU106:B.OE1/1
DC1903:F.OP1/1 2.88 GLY41:B.N/1
DG1905:F.OP2/1 2.57 THR250:B.OG1/1
DG1905:F.OP2/1 3 ARG332:B.NH2/1
DG1905:F.O5'/1 2.9 ARG332:B.NH2/1
DT1906:F.OP1/1 2.82 ILE248:B.N/1
DT1906:F.O5'/1 2.93 ARG247:B.NH1/1
DA1907:F.OP1/1 2.3 LYS78:B.NZ/1
DA1907:F.OP2/1 2.98 LYS275:B.NZ/1
DG1908:F.OP1/1 2.99 ARG242:B.NH2/1
DG1908:F.OP1/1 3.43 LYS275:B.NZ/1
DG1908:F.OP2/1 2.75 GLY246:B.N/1
DT1909:F.OP1/1 2.55 LYS243:B.N/1
DT1909:F.OP2/1 2.62 SER244:B.OG/1
DC1910:F.OP2/1 2.67 LYS243:B.NZ/1
DT1912:F.OP1/1 2.87 ALA220:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA1807:E.OP1/1 2.76 3:E/1 2.81 GLY299:B.O/1
DA1807:E.OP1/1 2.76 3:E/1 3.03 LYS321:B.NZ/1
DA1810:E.N3/1 2.76 69:E/1 3.25 LYS221:B.NZ/1
DC1813:E.O3'/1 2.94 865:B/1 2.15 ASP105:B.OD1/1
DC1813:E.O3'/1 2.94 865:B/1 2.79 GLU106:B.OE1/1
DC1903:F.O3'/1 2.44 1:F/1 2.96 SER34:B.OG/1
DA1904:F.OP1/1 2.8 191:F/1 2.8 ARG332:B.NH1/1
DG1908:F.OP2/1 2.6 183:F/1 2.96 SER244:B.OG/1
DG1908:F.OP2/1 2.6 183:F/1 2.62 ARG336:B.NE/1
DG1908:F.OP2/1 2.6 183:F/1 3.07 ARG336:B.NH2/1
DG1908:F.N7/1 2.81 306:F/1 3.34 ARG336:B.NH1/1
DT1909:F.O4/1 2.67 64:F/1 3.08 ARG336:B.NH1/1
DT1912:F.OP1/1 2.88 808:B/1 2.91 ILE217:B.O/1
DT1912:F.OP1/1 2.88 808:B/1 2.88 LYS221:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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