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Nucleic atom dist Protein atom
DA11:I.OP2/1 2.98 LYS874:C.NZ/1
DA19:I.OP1/1 2.69 SER1253:D.N/1
DA19:I.OP1/1 3.15 SER1253:D.OG/1
DA19:I.OP2/1 2.99 SER1253:D.OG/1
DA30:I.OP1/1 2.7 ARG832:C.NH1/1
DG31:I.OP1/1 3.01 ARG817:C.N/1
DG31:I.OP2/1 2.79 ARG817:C.NE/1
DT32:I.OP1/1 2.81 ARG820:C.NE/1
DT32:I.OP1/1 3.01 ARG820:C.NH1/1
DT32:I.OP1/1 2.61 ARG820:C.NH2/1
DT32:I.OP2/1 3.03 ARG820:C.NH2/1
DT32:I.OP2/1 3.2 LYS1322:D.NZ/1
DT32:I.O5'/1 3.29 LYS1322:D.NZ/1
DG40:I.OP1/1 3.23 THR1285:D.N/1
DG40:I.OP1/1 2.82 THR1285:D.OG1/1
DG40:I.OP2/1 3.14 SER1284:D.N/1
DA41:I.OP2/1 2.89 ARG1283:D.NH2/1
DC47:I.OP1/1 2.56 LYS1425:H.N/1
DC50:I.OP2/1 3.03 SER486:A.N/1
DA51:I.OP1/1 2.83 ARG472:A.NH1/1
DA51:I.OP1/1 2.94 PHE484:A.N/1
DA51:I.OP2/1 2.85 ARG472:A.NH2/1
DC60:I.OP1/1 2.77 ARG36:B.NH2/1
DC60:I.OP2/1 2.98 ARG36:B.NH1/1
DG68:I.OP1/1 2.68 ARG442:A.NH1/1
DG70:I.OP1/1 2.85 VAL517:A.N/1
DG70:I.OP1/1 2.63 THR518:A.OG1/1
DT80:I.OP1/1 3 GLY248:F.N/1
DG81:I.OP1/1 2.66 ILE246:F.N/1
DG81:I.OP2/1 2.55 ARG235:F.NH1/1
DG81:I.O3'/1 3.22 GLY644:E.N/1
DA82:I.OP1/1 2.81 GLY644:E.N/1
DA82:I.OP1/1 2.89 VAL646:E.N/1
DA82:I.OP1/1 3.14 ALA647:E.N/1
DA82:I.N3/1 3.26 ARG640:E.NH1/1
DA83:I.OP1/1 2.79 TYR641:E.N/1
DA83:I.O4'/1 3.12 ARG640:E.NH2/1
DT90:I.OP2/1 2.51 ARG669:E.NH2/1
DT91:I.OP1/1 2.61 ARG663:E.NH1/1
DT91:I.OP1/1 2.98 LYS664:E.N/1
DT91:I.OP1/1 2.97 LYS664:E.N/1
DT91:I.OP2/1 2.9 LEU665:E.N/1
DC101:I.OP1/1 2.86 LYS279:F.N/1
DC101:I.OP1/1 2.74 THR280:F.OG1/1
DG103:I.OP1/1 3.39 THR1229:D.N/1
DG103:I.N2/1 3.36 ARG1226:D.NH1/1
DA111:I.OP1/1 2.93 ALA1045:G.N/1
DT112:I.OP1/1 2.94 ARG1035:G.NH1/1
DT112:I.OP1/1 2.63 ARG1035:G.NH2/1
DT112:I.OP1/1 3.01 VAL1043:G.N/1
DG122:I.OP1/1 2.98 ARG1029:G.NH2/1
DG122:I.OP1/1 3.24 SER1433:H.N/1
DG122:I.OP1/1 3.13 SER1433:H.O/1
DT123:I.OP1/1 3.17 LYS1431:H.N/1
DC132:I.OP1/1 3.23 THR1076:G.N/1
DC132:I.OP1/1 2.98 ARG1077:G.N/1
DC132:I.OP2/1 3.26 THR1076:G.N/1
DG144:I.OP1/1 2.8 ARG442:A.N/1
DG144:I.OP1/1 2.65 THR445:A.OG1/1
DA165:J.OP1/1 2.96 SER1453:H.N/1
DA174:J.OP1/1 2.72 ARG1427:H.NH2/1
DA175:J.OP1/1 3.07 GLU1432:H.OE1/1
DA176:J.OP1/1 2.83 ARG1032:G.NH1/1
DG177:J.OP1/1 3.17 ARG1017:G.N/1
DG177:J.OP2/1 2.95 ARG1017:G.NE/1
DG177:J.OP2/1 2.91 ARG1017:G.NH2/1
DT178:J.OP1/1 2.69 ARG1020:G.NH2/1
DG185:J.O4'/1 3.24 ARG1042:G.NH1/1
DG186:J.OP1/1 3.01 THR1485:H.N/1
DG186:J.OP2/1 3 SER1484:H.N/1
DA187:J.OP2/1 2.82 ARG1483:H.NH2/1
DC196:J.OP2/1 3.14 SER686:E.N/1
DA197:J.OP1/1 2.86 ARG672:E.NH1/1
DA197:J.OP1/1 2.93 PHE684:E.N/1
DA197:J.OP2/1 2.95 ARG672:E.NH2/1
DC199:J.OP1/1 3.19 ARG217:F.NH2/1
DA207:J.OP1/1 2.73 ARG236:F.NH2/1
DA207:J.OP2/1 2.88 ARG236:F.NH1/1
DC215:J.OP1/1 2.83 ARG642:E.NE/1
DC215:J.OP1/1 2.77 ARG642:E.NH2/1
DG217:J.OP1/1 2.91 VAL717:E.N/1
DG217:J.OP1/1 2.59 THR718:E.OG1/1
DG227:J.OP2/1 2.8 GLY48:B.N/1
DA228:J.OP1/1 2.7 ILE46:B.N/1
DA228:J.OP2/1 2.57 ARG35:B.NH2/1
DA228:J.O3'/1 3.2 GLY444:A.N/1
DA229:J.OP1/1 2.98 GLY444:A.N/1
DA229:J.OP1/1 2.91 VAL446:A.N/1
DA229:J.OP1/1 2.98 ALA447:A.N/1
DA229:J.N3/1 2.65 ARG440:A.NH2/1
DC230:J.OP1/1 3 TYR441:A.N/1
DT237:J.OP1/1 2.84 ARG469:A.NH2/1
DT237:J.OP2/1 2.97 ARG469:A.NH1/1
DT238:J.OP1/1 3.18 LYS464:A.N/1
DT238:J.OP2/1 2.88 LEU465:A.N/1
DC247:J.OP1/1 2.84 LYS79:B.N/1
DC247:J.OP1/1 2.65 THR80:B.OG1/1
DG249:J.OP1/1 3.24 THR1429:H.N/1
DG249:J.OP2/1 2.7 THR1429:H.OG1/1
DG249:J.N2/1 2.95 ARG1426:H.NH2/1
DT250:J.OP1/1 2.62 ARG1426:H.O/1
DA257:J.OP1/1 3.18 ALA845:C.N/1
DT258:J.OP2/1 2.88 ARG835:C.NH1/1
DT258:J.OP2/1 2.63 ARG835:C.NH2/1
DT258:J.OP2/1 2.66 VAL843:C.N/1
DT258:J.OP2/1 3.19 VAL843:C.O/1
DG268:J.OP1/1 2.76 ARG829:C.NH2/1
DG268:J.OP1/1 3.07 SER1233:D.N/1
DG268:J.OP1/1 3 SER1233:D.O/1
DT269:J.OP1/1 2.96 LYS1231:D.N/1
DC278:J.OP1/1 3.06 THR876:C.N/1
DC278:J.OP1/1 3.01 ARG877:C.N/1
DC278:J.OP2/1 3.21 THR876:C.N/1
DG290:J.OP1/1 2.82 ARG642:E.N/1
DG290:J.OP1/1 2.62 THR645:E.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA19:I.OP1/1 2.92 3194:I/1 3.14 LYS1254:D.N/1
DT20:I.OP1/1 2.38 3062:I/1 2.83 ILE1251:D.N/1
DG31:I.OP1/1 3.05 3090:C/1 2.98 SER818:C.OG/1
DG31:I.OP1/1 3.05 3090:C/1 3.13 GLY828:C.N/1
DC50:I.OP1/1 2.95 3605:A/1 2.9 GLN485:A.NE2/1
DC50:I.OP2/1 2.83 3124:I/1 2.85 SER486:A.OG/1
DC50:I.OP2/1 2.83 3124:I/1 2.85 SER487:A.N/1
DC50:I.OP2/1 2.83 3124:I/1 2.99 SER487:A.OG/1
DC60:I.OP1/1 2.69 3081:B/1 2.58 THR30:B.OG1/1
DA61:I.OP1/1 2.19 3828:I/1 2.96 ARG23:B.NH1/1
DC69:I.OP1/1 2.83 3546:I/1 2.94 PRO443:A.O/1
DC79:I.O2/1 2.71 3570:I/1 2.9 ARG245:F.NH2/1
DG81:I.OP1/1 2.43 3335:I/1 3.01 ARG235:F.NH1/1
DG81:I.OP1/1 2.43 3335:I/1 2.87 ARG239:F.NH1/1
DG81:I.OP1/1 2.43 3335:I/1 2.65 ARG239:F.NH2/1
DG81:I.OP2/1 2.75 3016:F/1 3.39 ARG235:F.NH1/1
DG81:I.OP2/1 2.75 3016:F/1 2.52 ILE246:F.O/1
DG81:I.OP2/1 2.75 3016:F/1 2.62 TYR251:F.OH/1
DG81:I.N2/1 3.08 3802:I/1 3.01 ARG640:E.NH1/1
DA83:I.OP1/1 2.68 3107:I/1 2.7 HIS639:E.ND1/1
DA83:I.OP2/1 2.66 3213:I/1 2.92 ARG649:E.NH1/1
DA83:I.N3/1 2.82 3291:E/1 2.59 ARG640:E.NH2/1
DT91:I.OP1/1 2.54 3771:I/1 2.9 ARG663:E.NH1/1
DG122:I.OP2/1 2.74 3633:I/1 2.75 SER1433:H.O/1
DG122:I.OP2/1 2.74 3633:I/1 3 ILE1436:H.N/1
DT130:I.O2/1 3.14 3387:G/1 2.78 ARG1077:G.NH2/1
DG131:I.N3/1 2.51 3277:I/1 3.1 ARG1077:G.NH1/1
DC132:I.OP1/1 2.86 3505:G/1 2.7 ARG1077:G.O/1
DA151:J.N3/1 2.82 3856:A/1 3.25 TYR441:A.OH/1
DT152:J.O2/1 2.84 3289:A/1 2.81 TYR441:A.OH/1
DA153:J.O4'/1 3.11 3289:A/1 2.81 TYR441:A.OH/1
DA165:J.OP1/1 2.85 3303:J/1 3.01 LYS1454:H.N/1
DT166:J.OP1/1 2.47 3576:J/1 3.07 ILE1451:H.N/1
DA176:J.OP1/1 2.93 3795:J/1 3.44 ARG1029:G.NE/1
DG177:J.OP1/1 3.01 3330:J/1 3.15 SER1018:G.N/1
DG177:J.OP1/1 3.01 3330:J/1 3.06 GLY1028:G.N/1
DC196:J.OP1/1 2.74 3583:J/1 3.12 GLN685:E.NE2/1
DC196:J.OP2/1 2.98 3115:E/1 2.72 SER686:E.OG/1
DC196:J.OP2/1 2.98 3115:E/1 2.91 SER687:E.N/1
DA197:J.OP1/1 3.05 3640:E/1 2.84 ARG672:E.NH1/1
DA197:J.OP2/1 2.69 3610:J/1 3.36 ARG672:E.NH2/1
DA197:J.OP2/1 2.51 3363:J/1 2.61 PHE684:E.O/1
DC206:J.OP1/1 2.84 3353:J/1 2.91 ARG663:E.NH1/1
DA207:J.OP1/1 2.88 3823:E/1 2.31 ARG663:E.NE/1
DA207:J.OP1/1 2.9 3076:F/1 2.52 THR230:F.OG1/1
DA207:J.OP1/1 2.88 3823:E/1 3.14 ARG236:F.NH2/1
DT208:J.OP2/1 2.62 3024:J/1 2.93 LYS231:F.N/1
DG216:J.O4'/1 2.91 3626:J/1 3.39 ARG245:F.NH2/1
DA228:J.OP1/1 2.48 3096:J/1 3.03 ARG35:B.NH1/1
DA228:J.OP1/1 2.48 3096:J/1 2.55 ARG39:B.NH2/1
DA228:J.OP1/1 2.48 3096:J/1 2.91 LYS44:B.O/1
DA228:J.OP2/1 2.97 3108:B/1 2.56 ILE46:B.O/1
DA228:J.OP2/1 2.97 3108:B/1 2.72 TYR51:B.OH/1
DC230:J.OP1/1 2.93 3543:A/1 2.28 HIS439:A.ND1/1
DT238:J.OP1/1 2.78 3306:A/1 2.57 ARG463:A.NH1/1
DG246:J.OP1/1 2.63 3562:J/1 2.79 ASP481:A.OD2/1
DA248:J.OP1/1 2.64 3571:J/1 2.98 GLN485:A.NE2/1
DG267:J.OP1/1 2.73 3349:D/1 2.54 TYR1237:D.OH/1
DG267:J.N2/1 2.66 3744:J/1 2.9 ARG1230:D.NH1/1
DG268:J.OP2/1 2.79 3751:D/1 2.87 SER1233:D.O/1
DG268:J.OP2/1 2.79 3751:D/1 2.78 ILE1236:D.N/1
DC278:J.OP1/1 2.7 3040:C/1 2.64 ARG877:C.O/1
DT289:J.O2/1 2.73 3806:E/1 2.66 HIS639:E.NE2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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