Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DG5:G.OP2/1 2.61 LYS339:C.NZ/1
DA6:G.OP1/1 3.11 THR301:C.N/1
DA6:G.OP2/1 2.51 THR301:C.OG1/1
DA7:G.OP2/1 2.63 GLY299:C.N/1
DG8:G.OP2/1 2.65 SER297:C.N/1
DG8:G.OP2/1 3.04 SER297:C.O/1
DC11:G.OP1/1 2.85 GLY187:C.N/1
DC11:G.OP1/1 2.91 THR190:C.N/1
DC11:G.OP1/1 2.58 THR190:C.OG1/1
DC11:G.OP2/1 3.25 ILE189:C.N/1
DT12:G.OP1/1 2.96 GLY185:C.N/1
DG13:G.OP2/1 2.69 GLU106:C.OE2/1
DG13:G.OP2/1 2.56 LYS152:C.NZ/1
DA4:K.OP1/1 3.16 SER40:C.OG/1
DA4:K.OP1/1 2.6 GLY41:C.N/1
DA4:K.OP2/1 2.85 ARG331:C.NH2/1
DG5:K.OP1/1 3.11 ARG331:C.NE/1
DG5:K.OP1/1 2.75 ARG331:C.NH2/1
DT6:K.OP2/1 2.94 ARG332:C.NE/1
DT6:K.OP2/1 2.88 ARG332:C.NH2/1
DA7:K.OP2/1 3.2 ARG247:C.NH1/1
DA7:K.OP2/1 2.76 ILE248:C.N/1
DG8:K.OP2/1 2.72 GLY246:C.N/1
DG8:K.OP2/1 2.67 ARG336:C.NH2/1
DG8:K.O5'/1 2.99 ARG336:C.NH2/1
DT9:K.OP1/1 2.5 LYS243:C.N/1
DT9:K.OP2/1 3.02 SER244:C.N/1
DT9:K.OP2/1 2.42 SER244:C.OG/1
DC10:K.OP1/1 2.87 LYS243:C.NZ/1
DC10:K.OP2/1 2.7 LYS243:C.NZ/1
DT12:K.OP1/1 2.78 ALA220:C.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA7:G.OP1/1 2.93 345:G/1 2.94 LYS321:C.NZ/1
DT12:G.OP1/1 3.05 763:C/1 2.95 VAL183:C.O/1
DT12:G.OP1/1 3.05 763:C/1 3.07 ILE186:C.O/1
DG13:G.OP1/1 2.47 172:G/1 3.21 GLU106:C.OE2/1
DT2:K.O4'/1 2.63 482:K/1 3.03 ARG36:C.NE/1
DT2:K.O4'/1 2.63 482:K/1 3.17 ARG36:C.NH2/1
DG5:K.OP2/1 2.5 82:K/1 2.58 ARG332:C.NH1/1
DC11:K.O3'/1 3.23 737:C/1 2.61 LYS221:C.N/1
DT12:K.OP1/1 2.63 737:C/1 3.13 ILE217:C.O/1
DT12:K.OP1/1 2.63 737:C/1 2.61 LYS221:C.N/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text