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Nucleic atom dist Protein atom
DA6:H.OP2/1 3.12 THR301:D.OG1/1
DA7:H.OP2/1 2.53 GLY299:D.N/1
DG8:H.OP2/1 2.6 SER297:D.N/1
DG8:H.OP2/1 3.28 SER297:D.O/1
DC11:H.OP1/1 2.92 GLY187:D.N/1
DC11:H.OP1/1 2.9 THR190:D.N/1
DC11:H.OP1/1 2.57 THR190:D.OG1/1
DC11:H.OP2/1 3.29 ILE189:D.N/1
DT12:H.OP1/1 3.14 GLY185:D.N/1
DG13:H.OP2/1 2.86 LYS152:D.NZ/1
DA4:L.OP1/1 2.93 GLY41:D.N/1
DA4:L.OP2/1 3.05 ARG331:D.NH2/1
DG5:L.OP1/1 2.83 ARG331:D.NE/1
DG5:L.OP1/1 2.8 ARG331:D.NH2/1
DT6:L.OP1/1 3.37 THR250:D.N/1
DT6:L.OP2/1 3.03 THR250:D.OG1/1
DT6:L.OP2/1 3.26 ARG332:D.NE/1
DA7:L.OP2/1 2.72 ILE248:D.N/1
DG8:L.OP2/1 2.79 GLY246:D.N/1
DG8:L.OP2/1 2.44 ARG336:D.NH2/1
DG8:L.O5'/1 2.73 ARG336:D.NH2/1
DT9:L.OP1/1 2.66 LYS243:D.N/1
DT9:L.OP2/1 2.78 SER244:D.N/1
DT9:L.OP2/1 2.77 SER244:D.OG/1
DT12:L.OP1/1 3.22 ALA220:D.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA7:H.OP2/1 2.85 21:H/1 3.32 HIS285:D.ND1/1
DA7:H.OP2/1 2.85 21:H/1 2.97 SER297:D.OG/1
DT12:H.OP1/1 3.22 763:D/1 2.61 VAL183:D.O/1
DA4:L.OP1/1 3.17 718:D/1 2.55 SER34:D.OG/1
DG5:L.OP1/1 3.1 718:D/1 2.55 SER34:D.OG/1
DG5:L.OP1/1 3.1 718:D/1 3.06 ARG331:D.NH2/1
DT6:L.OP1/1 2.49 544:L/1 2.73 THR250:D.N/1
DA7:L.N7/1 3.45 744:D/1 2.66 ARG332:D.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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