Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA25:B.OP1/1 2.77 THR556:A.N/1
DA25:B.OP1/1 2.58 THR556:A.OG1/1
DC26:B.OP1/1 2.89 ARG578:A.NH1/1
DC26:B.OP2/1 3.25 ALA558:A.N/1
DT27:B.O2/1 3.03 ASN625:A.ND2/1
DC28:B.OP1/1 2.83 ILE628:A.N/1
DC28:B.OP1/1 2.86 ARG629:A.N/1
DG29:B.OP2/1 3.05 ARG629:A.NE/1
DG29:B.OP2/1 3.2 ARG629:A.NH2/1
DG29:B.O3'/1 2.28 ASP830:A.OD1/1
DG29:B.N7/1 2.93 ARG629:A.NH2/1
DG29:B.N3/1 2.92 ARG615:A.NH1/1
DG29:B.N3/1 3.23 ARG615:A.NH2/1
DT2:C.O4'/1 3.29 ARG789:A.NH2/1
DT2:C.O2/1 2.84 SER717:A.OG/1
DC4:C.OP1/1 3.2 ARG789:A.NE/1
DC4:C.OP1/1 3.26 ARG789:A.NH2/1
DG5:C.OP1/1 3.05 ARG771:A.NH1/1
DG5:C.OP1/1 2.8 ARG771:A.NH2/1
DG5:C.O4'/1 2.9 GLN797:A.OE1/1
DA6:C.OP1/1 2.86 GLN612:A.N/1
DG7:C.OP1/1 3.04 SER617:A.OG/1
DT8:C.OP1/1 2.83 GLU620:A.N/1
DG11:C.OP1/1 2.83 ASN527:A.ND2/1
DG12:C.OP1/1 2.62 SER530:A.OG/1
DG12:C.OP1/1 3.32 GLN533:A.NE2/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA25:B.OP2/1 2.56 2673:B/1 2.96 SER555:A.OG/1
DT27:B.OP1/1 2.71 2060:B/1 3.04 GLN579:A.O/1
DC28:B.OP1/1 2.75 1018:B/1 2.94 LEU630:A.N/1
DC28:B.O2/1 2.67 1006:B/1 2.79 GLN624:A.O/1
DC28:B.O2/1 2.67 1006:B/1 2.88 HIS829:A.NE2/1
DG29:B.OP1/1 2.69 2555:B/1 2.89 ARG637:A.NH2/1
DG29:B.N7/1 3.37 2832:B/1 3.05 ARG629:A.NH1/1
DG29:B.O6/1 2.89 2832:B/1 3.05 ARG629:A.NH1/1
DG29:B.O6/1 2.89 2832:B/1 3.08 ARG629:A.NH2/1
DC4:C.O3'/1 2.94 2518:A/1 2.85 ASN793:A.OD1/1
DC4:C.O2/1 2.95 2515:A/1 2.78 GLU658:A.OE1/1
DC4:C.O2/1 2.95 2515:A/1 2.87 ASN793:A.ND2/1
DC4:C.O2/1 2.95 2515:A/1 2.92 GLN797:A.OE1/1
DG5:C.N2/1 3.07 1046:C/1 3 ARG615:A.NH1/1
DG5:C.N3/1 2.86 1046:C/1 3 ARG615:A.NH1/1
DA6:C.OP1/1 2.68 2047:C/1 3.02 GLN612:A.NE2/1
DA6:C.N3/1 2.81 1028:C/1 3.06 ASN622:A.ND2/1
DG7:C.N2/1 2.95 1050:C/1 3.2 LYS582:A.NZ/1
DG7:C.N2/1 2.95 1050:C/1 3.19 ASN625:A.ND2/1
DT8:C.O4'/1 2.81 1050:C/1 3.2 LYS582:A.NZ/1
DT8:C.O4'/1 2.81 1050:C/1 3.19 ASN625:A.ND2/1
DC9:C.OP1/1 2.61 2600:C/1 2.72 GLY590:A.O/1
DC9:C.OP1/1 2.76 3143:C/1 3.28 LYS593:A.NZ/1
DA10:C.OP1/1 2.84 2833:A/1 2.79 SER585:A.O/1
DA10:C.N3/1 2.76 2362:C/1 2.77 ASN529:A.O/1
DG11:C.OP1/1 2.63 2124:C/1 2.77 ASN529:A.ND2/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text