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Nucleic atom dist Protein atom
DA24:B.OP1/1 2.56 THR550:A.OG1/1
DA24:B.OP1/1 2.63 THR552:A.OG1/1
DT25:B.OP1/1 2.65 THR556:A.N/1
DT25:B.OP1/1 2.77 THR556:A.OG1/1
DT25:B.O3'/1 3.08 ARG578:A.NH1/1
DG26:B.OP1/1 2.79 ARG578:A.NH1/1
DG26:B.OP2/1 2.72 ALA558:A.N/1
DG26:B.N3/1 3.05 LYS582:A.NZ/1
DG27:B.N3/1 3.15 ASN625:A.ND2/1
DT28:B.OP1/1 2.81 ILE628:A.N/1
DT28:B.OP1/1 2.81 ARG629:A.N/1
DG29:B.O3'/1 3.34 ASP830:A.N/1
DG29:B.O3'/1 2.37 ASP830:A.OD1/1
DG29:B.N3/1 3 ARG615:A.NH1/1
DG29:B.N3/1 3.34 ARG615:A.NH2/1
DT2:C.O4'/1 2.7 GLN723:A.OE1/1
DT2:C.O2/1 2.7 ALA722:A.N/1
DT2:C.N3/1 3.39 ALA722:A.N/1
DG3:C.O3'/1 2.85 ARG789:A.NE/1
DC4:C.OP1/1 3.16 ARG789:A.NE/1
DC4:C.OP1/1 3.15 ARG789:A.NH2/1
DA5:C.OP1/1 3.06 ARG771:A.NH1/1
DA5:C.OP1/1 2.76 ARG771:A.NH2/1
DA5:C.O4'/1 2.88 GLN797:A.NE2/1
DC6:C.OP1/1 2.77 GLN612:A.N/1
DC7:C.OP1/1 3 SER617:A.OG/1
DA8:C.OP1/1 2.73 GLU620:A.N/1
DC11:C.OP1/1 3.24 ASN527:A.ND2/1
DC12:C.OP1/1 2.56 SER530:A.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT25:B.O2/1 2.72 1056:B/1 2.85 LYS582:A.NZ/1
DG26:B.O4'/1 3.17 1056:B/1 2.85 LYS582:A.NZ/1
DG26:B.N2/1 2.87 2734:B/1 3.09 TYR587:A.OH/1
DG27:B.OP1/1 2.95 2347:A/1 2.94 ARG578:A.O/1
DG27:B.OP1/1 2.67 2060:B/1 3.09 GLN579:A.O/1
DT28:B.OP1/1 2.85 2147:B/1 3.05 LEU630:A.N/1
DT28:B.O2/1 2.63 1006:B/1 2.81 GLN624:A.O/1
DT28:B.O2/1 2.63 1006:B/1 2.74 HIS829:A.NE2/1
DG29:B.OP1/1 2.96 1013:A/1 2.8 ARG637:A.NH2/1
DG29:B.OP1/1 2.96 1013:A/1 2.93 GLU831:A.OE2/1
DG3:C.N7/1 2.88 2860:A/1 2.69 ALA707:A.O/1
DG3:C.O6/1 3.24 2860:A/1 2.69 ALA707:A.O/1
DC4:C.O3'/1 2.97 2771:A/1 2.82 ASN793:A.OD1/1
DC4:C.O3'/1 2.97 2771:A/1 3.01 THR794:A.OG1/1
DC4:C.O2/1 2.98 2804:A/1 2.88 ASN793:A.ND2/1
DC4:C.O2/1 2.98 2804:A/1 2.97 GLN797:A.NE2/1
DA5:C.N3/1 2.94 1046:C/1 2.99 ARG615:A.NH1/1
DC6:C.OP1/1 2.7 2047:C/1 2.95 GLN612:A.NE2/1
DC6:C.O2/1 2.82 2837:C/1 3.01 ASN622:A.ND2/1
DA8:C.O4'/1 2.56 1050:C/1 2.94 ASN625:A.ND2/1
DA8:C.N3/1 2.83 2161:A/1 2.63 LYS582:A.NZ/1
DA8:C.N3/1 2.83 2161:A/1 2.59 THR586:A.OG1/1
DT9:C.OP1/1 2.68 2039:C/1 2.68 GLY590:A.O/1
DT9:C.OP1/1 2.63 2939:C/1 2.65 LYS593:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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