Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC6:E.OP1/1 2.96 ARG500:B.NH2/1
DC7:E.OP1/1 2.68 LYS496:B.N/1
DG9:E.N2/1 2.97 MET33:A.O/1
DG10:E.O5'/1 3.01 GLN95:A.OE1/1
DG10:E.O3'/1 2.95 ARG108:A.NH2/1
DG10:E.N2/1 3.22 GLU38:A.OE2/1
DC11:E.OP1/1 2.72 VAL106:A.N/1
DC11:E.OP1/1 2.92 ARG108:A.NH1/1
DC11:E.O2/1 3.01 ARG58:A.NH2/1
DA12:E.OP1/1 2.71 MET13:A.N/1
DA12:E.O4'/1 2.96 ARG58:A.NH1/1
DC13:E.OP1/1 2.88 SER61:A.N/1
DG18:F.OP2/1 3.26 ASN497:B.ND2/1
DT22:F.N3/1 2.78 GLU38:A.OE2/1
DT23:F.OP1/1 2.83 SER54:A.N/1
DG24:F.OP1/1 2.62 TYR79:A.OH/1
DG28:F.OP1/1 3.01 ASN468:A.ND2/1
DG28:F.OP1/1 2.89 ARG500:A.NH1/1
DG28:F.OP2/1 3.08 ARG500:A.NH2/1
DC29:F.OP1/1 2.96 LYS496:A.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DC7:E.OP1/1 3 2003:E/1 3.3 HIS471:A.NE2/1
DC7:E.OP2/1 2.7 2002:E/1 2.96 ASN497:B.N/1
DC14:E.OP1/1 2.37 2005:E/1 2.69 ALA60:A.O/1
DT22:F.O3'/1 2.91 2012:A/1 2.7 SER54:A.O/1
DT22:F.O3'/1 2.91 2012:A/1 2.99 GLY70:A.N/1
DG28:F.OP2/1 2.44 2005:F/1 3.43 ASN468:A.ND2/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text