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Nucleic atom dist Protein atom
DG2:E.OP1/1 3.25 GLY34:B.N/1
DC6:E.OP1/1 3 ARG500:B.NH1/1
DC6:E.OP1/1 3.03 ARG500:B.NH2/1
DC7:E.OP1/1 2.79 LYS496:B.N/1
DA8:E.OP2/1 3.12 LYS496:B.NZ/1
DG9:E.N2/1 2.88 MET33:A.O/1
DG10:E.O5'/1 3.07 GLN95:A.NE2/1
DG10:E.O3'/1 3.25 ARG108:A.NH2/1
DC11:E.OP1/1 2.91 VAL106:A.N/1
DC11:E.OP1/1 2.94 ARG108:A.NH1/1
DC11:E.O2/1 2.79 ARG58:A.NH2/1
DA12:E.OP1/1 2.86 MET13:A.N/1
DA12:E.O4'/1 2.75 ARG58:A.NH2/1
DC13:E.OP1/1 3.08 SER61:A.N/1
DG18:F.OP1/1 2.4 SER478:B.OG/1
DG18:F.O3'/1 3.3 LYS464:B.NZ/1
DT19:F.OP1/1 2.58 LYS464:B.NZ/1
DT23:F.OP1/1 2.82 SER54:A.N/1
DG24:F.OP1/1 2.68 TYR79:A.OH/1
DG28:F.OP1/1 2.98 ASN468:A.ND2/1
DG28:F.OP1/1 2.98 GLN493:A.NE2/1
DG28:F.OP1/1 2.99 ARG500:A.NH1/1
DG28:F.OP2/1 3.06 ARG500:A.NH2/1
DC29:F.OP1/1 2.97 LYS496:A.N/1
DT30:F.OP1/1 2.87 LYS496:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC7:E.OP1/1 2.97 2008:E/1 3.16 HIS471:A.NE2/1
DC7:E.OP2/1 2.53 2007:E/1 3 ASN497:B.N/1
DG18:F.OP2/1 2.86 2258:B/1 2.91 GLY480:B.N/1
DG18:F.OP2/1 2.86 2258:B/1 2.81 ASN497:B.OD1/1
DG20:F.N2/1 3.42 2006:F/1 3.1 ARG58:A.NH1/1
DC21:F.O2/1 3.02 2006:F/1 3.1 ARG58:A.NH1/1
DT22:F.O3'/1 2.8 2055:A/1 2.66 SER54:A.O/1
DT22:F.O3'/1 2.8 2055:A/1 3.07 GLY70:A.N/1
DT22:F.N3/1 2.87 2043:A/1 2.5 THR38:A.OG1/1
DG28:F.OP2/1 2.76 2014:F/1 3.06 ASN468:A.ND2/1
DG28:F.OP2/1 2.76 2014:F/1 3.24 ARG500:A.NH1/1
DT30:F.OP1/1 3.03 2314:A/1 2.62 ASN497:A.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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