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Nucleic atom dist Protein atom
DT3:C.O2/1 2.99 LYS244:B.NZ/2
DC6:C.OP1/1 2.56 ARG159:B.NH1/2
DC6:C.OP1/1 2.86 VAL242:B.N/2
DC6:C.OP1/1 3.2 VAL242:B.O/2
DC6:C.OP2/1 2.71 GLN156:B.NE2/2
DT7:C.OP2/1 3.18 SER257:B.N/2
DT11:C.OP2/1 2.54 SER47:B.OG/2
DA12:C.OP1/1 2.84 ARG81:B.NH2/2
DA12:C.N3/1 3.36 ARG282:B.NH1/2
DA12:C.N3/1 3.1 ARG282:B.NH2/2
DT13:C.OP2/1 3.03 ALA84:B.N/2
DA14:C.OP1/1 2.82 LYS132:B.N/2
DA15:C.OP1/1 2.41 TYR324:B.OH/2
DA15:C.N7/1 2.59 LYS86:B.NZ/2
DA15:C.N3/1 2.61 LYS201:B.NZ/2
DT16:C.OP1/1 2.73 ARG173:B.NE/2
DT16:C.OP1/1 2.66 ARG173:B.NH2/2
DT16:C.OP1/1 2.98 ARG292:B.NH2/2
DT16:C.OP2/1 3.19 ARG292:B.NH2/2
DT16:C.OP2/1 3.2 TRP315:B.NE1/2
DT16:C.O4'/1 2.79 LYS201:B.NZ/2
DG17:C.OP1/1 2.92 THR316:B.N/2
DG17:C.O5'/1 2.68 THR316:B.OG1/2
DT23:C.OP2/1 3.1 SER38:A.N/1
DT23:C.OP2/1 2.47 THR41:A.OG1/1
DA24:C.OP2/1 3.26 HIS40:A.ND1/1
DT25:C.OP1/1 3 ALA175:A.N/1
DA26:C.OP2/1 2.5 GLU262:A.OE2/1
DA26:C.O4'/1 3.26 ARG282:A.NH1/1
DA26:C.N3/1 3.21 ARG282:A.NH2/1
DC27:C.OP1/1 3.01 TYR283:A.N/1
DG28:C.OP1/1 2.79 LYS276:A.NZ/1
DG28:C.N7/1 2.77 ARG259:A.NH2/1
DG28:C.O6/1 2.68 ARG259:A.NE/1
DT35:C.O2/1 2.83 LYS244:A.NZ/1
DT3:D.O2/1 2.5 LYS244:A.NZ/1
DC6:D.OP1/1 3.01 ARG159:A.NH1/1
DC6:D.OP1/1 2.79 VAL242:A.N/1
DC6:D.OP2/1 3.07 ARG159:A.NH2/1
DT7:D.OP2/1 3.23 SER257:A.N/1
DT7:D.OP2/1 2.91 SER257:A.OG/1
DT11:D.OP2/1 2.73 SER47:A.OG/1
DT11:D.OP2/1 3.29 ARG50:A.NE/1
DT11:D.OP2/1 2.91 ARG50:A.NH2/1
DA12:D.OP1/1 2.48 ARG81:A.NH2/1
DA12:D.N3/1 2.93 ARG282:A.NH2/1
DT13:D.OP2/1 3.13 ALA84:A.N/1
DT13:D.OP2/1 2.38 THR87:A.OG1/1
DT13:D.O4/1 3.21 GLN90:A.NE2/1
DA14:D.OP1/1 3.11 LYS132:A.N/1
DG15:D.OP1/1 2.41 TYR324:A.OH/1
DG15:D.N7/1 2.71 LYS86:A.NZ/1
DG15:D.O6/1 2.64 LYS86:A.NZ/1
DC16:D.OP1/1 3.27 ARG173:A.NH2/1
DC16:D.OP1/1 2.84 ARG292:A.NH2/1
DA19:D.OP1/1 2.89 ARG121:B.NH1/1
DT22:D.OP1/1 3 ARG101:B.NH2/1
DT22:D.OP2/1 3.11 ARG101:B.NE/1
DT23:D.OP1/1 2.83 ARG118:A.NH2/2
DT23:D.OP2/1 2.88 SER38:B.N/1
DT23:D.OP2/1 2.76 THR41:B.OG1/1
DA24:D.OP2/1 2.62 SER38:B.OG/1
DT25:D.OP1/1 3 ALA175:B.N/1
DA26:D.OP1/1 2.71 SER287:B.OG/1
DA26:D.OP1/1 3.35 HIS289:B.N/1
DA26:D.OP2/1 2.7 GLU262:B.OE2/1
DA26:D.OP2/1 2.81 GLY288:B.N/1
DA26:D.O4'/1 3.14 ARG282:B.NH1/1
DA26:D.N3/1 3.24 ARG282:B.NH2/1
DC27:D.OP1/1 2.99 TYR283:B.N/1
DG28:D.N7/1 2.76 ARG259:B.NH2/1
DG28:D.O6/1 2.86 ARG259:B.NE/1
DT35:D.O3'/1 3.13 ASN245:B.ND2/1
DT35:D.O2/1 2.26 LYS244:B.NZ/1
DT3:C.O2/2 2.99 LYS244:B.NZ/1
DC6:C.OP1/2 2.56 ARG159:B.NH1/1
DC6:C.OP1/2 2.86 VAL242:B.N/1
DC6:C.OP1/2 3.2 VAL242:B.O/1
DC6:C.OP2/2 2.71 GLN156:B.NE2/1
DT7:C.OP2/2 3.18 SER257:B.N/1
DT11:C.OP2/2 2.54 SER47:B.OG/1
DA12:C.OP1/2 2.84 ARG81:B.NH2/1
DA12:C.N3/2 3.36 ARG282:B.NH1/1
DA12:C.N3/2 3.1 ARG282:B.NH2/1
DT13:C.OP2/2 3.03 ALA84:B.N/1
DA14:C.OP1/2 2.82 LYS132:B.N/1
DA15:C.OP1/2 2.41 TYR324:B.OH/1
DA15:C.N7/2 2.59 LYS86:B.NZ/1
DA15:C.N3/2 2.61 LYS201:B.NZ/1
DT16:C.OP1/2 2.73 ARG173:B.NE/1
DT16:C.OP1/2 2.66 ARG173:B.NH2/1
DT16:C.OP1/2 2.98 ARG292:B.NH2/1
DT16:C.OP2/2 3.19 ARG292:B.NH2/1
DT16:C.OP2/2 3.2 TRP315:B.NE1/1
DT16:C.O4'/2 2.79 LYS201:B.NZ/1
DG17:C.OP1/2 2.92 THR316:B.N/1
DG17:C.O5'/2 2.68 THR316:B.OG1/1
DT23:C.OP2/2 3.1 SER38:A.N/2
DT23:C.OP2/2 2.47 THR41:A.OG1/2
DA24:C.OP2/2 3.26 HIS40:A.ND1/2
DT25:C.OP1/2 3 ALA175:A.N/2
DA26:C.OP2/2 2.5 GLU262:A.OE2/2
DA26:C.O4'/2 3.26 ARG282:A.NH1/2
DA26:C.N3/2 3.21 ARG282:A.NH2/2
DC27:C.OP1/2 3.01 TYR283:A.N/2
DG28:C.OP1/2 2.79 LYS276:A.NZ/2
DG28:C.N7/2 2.77 ARG259:A.NH2/2
DG28:C.O6/2 2.68 ARG259:A.NE/2
DT35:C.O2/2 2.83 LYS244:A.NZ/2
DT3:D.O2/2 2.5 LYS244:A.NZ/2
DC6:D.OP1/2 3.01 ARG159:A.NH1/2
DC6:D.OP1/2 2.79 VAL242:A.N/2
DC6:D.OP2/2 3.07 ARG159:A.NH2/2
DT7:D.OP2/2 3.23 SER257:A.N/2
DT7:D.OP2/2 2.91 SER257:A.OG/2
DT11:D.OP2/2 2.73 SER47:A.OG/2
DT11:D.OP2/2 3.29 ARG50:A.NE/2
DT11:D.OP2/2 2.91 ARG50:A.NH2/2
DA12:D.OP1/2 2.48 ARG81:A.NH2/2
DA12:D.N3/2 2.93 ARG282:A.NH2/2
DT13:D.OP2/2 3.13 ALA84:A.N/2
DT13:D.OP2/2 2.38 THR87:A.OG1/2
DT13:D.O4/2 3.21 GLN90:A.NE2/2
DA14:D.OP1/2 3.11 LYS132:A.N/2
DG15:D.OP1/2 2.41 TYR324:A.OH/2
DG15:D.N7/2 2.71 LYS86:A.NZ/2
DG15:D.O6/2 2.64 LYS86:A.NZ/2
DC16:D.OP1/2 3.27 ARG173:A.NH2/2
DC16:D.OP1/2 2.84 ARG292:A.NH2/2
DA19:D.OP1/2 2.89 ARG121:B.NH1/2
DT22:D.OP1/2 3 ARG101:B.NH2/2
DT22:D.OP2/2 3.11 ARG101:B.NE/2
DT23:D.OP1/2 2.83 ARG118:A.NH2/1
DT23:D.OP2/2 2.88 SER38:B.N/2
DT23:D.OP2/2 2.76 THR41:B.OG1/2
DA24:D.OP2/2 2.62 SER38:B.OG/2
DT25:D.OP1/2 3 ALA175:B.N/2
DA26:D.OP1/2 2.71 SER287:B.OG/2
DA26:D.OP1/2 3.35 HIS289:B.N/2
DA26:D.OP2/2 2.7 GLU262:B.OE2/2
DA26:D.OP2/2 2.81 GLY288:B.N/2
DA26:D.O4'/2 3.14 ARG282:B.NH1/2
DA26:D.N3/2 3.24 ARG282:B.NH2/2
DC27:D.OP1/2 2.99 TYR283:B.N/2
DG28:D.N7/2 2.76 ARG259:B.NH2/2
DG28:D.O6/2 2.86 ARG259:B.NE/2
DT35:D.O3'/2 3.13 ASN245:B.ND2/2
DT35:D.O2/2 2.26 LYS244:B.NZ/2
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Nucleic atom d_n2w water d_p2w Protein atom
DA4:C.N3/1 2.82 402:B/2 3.09 LYS244:B.N/2
DA5:C.OP1/1 2.46 409:B/2 3.3 ARG154:B.NH2/2
DA5:C.OP1/1 2.68 405:B/2 2.74 ARG243:B.O/2
DA5:C.O3'/1 3.01 439:B/2 2.96 ARG241:B.NE/2
DA5:C.O3'/1 3.01 439:B/2 3.01 ARG241:B.NH2/2
DA5:C.N3/1 2.46 428:B/2 3.01 ARG241:B.NH2/2
DG10:C.O5'/1 2.53 49:C/1 3.15 ARG50:B.NH1/2
DG10:C.O5'/1 2.53 49:C/1 3.28 ARG50:B.NH2/2
DA12:C.OP2/1 2.92 412:B/2 2.77 HIS91:B.NE2/2
DA14:C.OP1/1 2.66 56:C/1 3.06 ARG130:B.O/2
DA14:C.OP1/1 2.66 56:C/1 3.12 LYS132:B.NZ/2
DA14:C.OP2/1 2.57 416:B/2 3.01 LYS86:B.N/2
DA14:C.OP2/1 2.57 416:B/2 2.93 GLU129:B.OE2/2
DA15:C.OP1/1 2.63 472:B/2 2.76 ALA134:B.N/2
DA15:C.OP2/1 2.37 384:B/2 2.88 LYS132:B.O/2
DA15:C.OP2/1 2.37 384:B/2 2.72 ARG326:B.NH1/2
DA15:C.OP2/1 2.37 384:B/2 2.78 ARG326:B.NH2/2
DT16:C.OP2/1 2.22 443:B/2 2.85 HIS289:B.NE2/2
DT16:C.OP2/1 2.22 443:B/2 2.8 ARG292:B.NE/2
DT16:C.OP2/1 2.22 443:B/2 2.7 TYR324:B.OH/2
DG17:C.OP2/1 2.52 65:C/1 2.77 ASN317:B.OD1/2
DC22:C.OP1/1 2.16 42:C/1 2.97 ARG118:B.NH2/1
DA24:C.N7/1 3.16 388:A/1 2.78 HIS40:A.O/1
DA24:C.N6/1 3.16 388:A/1 2.78 HIS40:A.O/1
DC27:C.OP1/1 2.77 61:C/1 2.83 LYS276:A.NZ/1
DC27:C.OP1/1 2.77 61:C/1 3.15 TYR283:A.N/1
DC27:C.OP1/1 2.77 61:C/1 3.22 LEU284:A.N/1
DA4:D.N3/1 2.85 66:D/1 3.41 LYS244:A.N/1
DA5:D.OP1/1 2.22 57:D/1 3.07 ARG243:A.O/1
DA5:D.OP1/1 3.04 377:A/1 2.22 LYS244:A.O/1
DA5:D.O3'/1 2.48 56:D/1 3.45 ARG241:A.NH1/1
DA5:D.N3/1 2.6 42:D/1 3.21 ARG241:A.NH1/1
DT22:D.OP1/1 2.37 64:D/1 3.1 ARG118:A.NH1/2
DA24:D.OP1/1 2.82 39:D/1 3.18 ARG179:B.NH2/1
DA24:D.OP1/1 2.53 46:D/1 2.59 THR200:B.O/1
DA24:D.OP1/1 2.53 46:D/1 2.6 LYS201:B.O/1
DA24:D.N7/1 2.88 442:B/1 2.68 HIS40:B.O/1
DA24:D.N6/1 3.03 442:B/1 2.68 HIS40:B.O/1
DA26:D.OP1/1 3.02 438:B/1 2.69 TYR283:B.OH/1
DC27:D.OP1/1 2.54 37:D/1 2.89 LYS276:B.NZ/1
DC27:D.OP1/1 2.54 37:D/1 2.99 GLN281:B.O/1
DC27:D.OP1/1 2.54 37:D/1 3.23 TYR283:B.N/1
DC27:D.N4/1 2.24 51:D/1 2.86 GLU262:B.OE1/1
DG28:D.OP1/1 2.97 377:B/1 2.78 GLY280:B.O/1
DA4:C.N3/2 2.82 402:B/1 3.09 LYS244:B.N/1
DA5:C.OP1/2 2.46 409:B/1 3.3 ARG154:B.NH2/1
DA5:C.OP1/2 2.68 405:B/1 2.74 ARG243:B.O/1
DA5:C.O3'/2 3.01 439:B/1 2.96 ARG241:B.NE/1
DA5:C.O3'/2 3.01 439:B/1 3.01 ARG241:B.NH2/1
DA5:C.N3/2 2.46 428:B/1 3.01 ARG241:B.NH2/1
DG10:C.O5'/2 2.53 49:C/2 3.15 ARG50:B.NH1/1
DG10:C.O5'/2 2.53 49:C/2 3.28 ARG50:B.NH2/1
DA12:C.OP2/2 2.92 412:B/1 2.77 HIS91:B.NE2/1
DA14:C.OP1/2 2.66 56:C/2 3.06 ARG130:B.O/1
DA14:C.OP1/2 2.66 56:C/2 3.12 LYS132:B.NZ/1
DA14:C.OP2/2 2.57 416:B/1 3.01 LYS86:B.N/1
DA14:C.OP2/2 2.57 416:B/1 2.93 GLU129:B.OE2/1
DA15:C.OP1/2 2.63 472:B/1 2.76 ALA134:B.N/1
DA15:C.OP2/2 2.37 384:B/1 2.88 LYS132:B.O/1
DA15:C.OP2/2 2.37 384:B/1 2.72 ARG326:B.NH1/1
DA15:C.OP2/2 2.37 384:B/1 2.78 ARG326:B.NH2/1
DT16:C.OP2/2 2.22 443:B/1 2.85 HIS289:B.NE2/1
DT16:C.OP2/2 2.22 443:B/1 2.8 ARG292:B.NE/1
DT16:C.OP2/2 2.22 443:B/1 2.7 TYR324:B.OH/1
DG17:C.OP2/2 2.52 65:C/2 2.77 ASN317:B.OD1/1
DC22:C.OP1/2 2.16 42:C/2 2.97 ARG118:B.NH2/2
DA24:C.N7/2 3.16 388:A/2 2.78 HIS40:A.O/2
DA24:C.N6/2 3.16 388:A/2 2.78 HIS40:A.O/2
DC27:C.OP1/2 2.77 61:C/2 2.83 LYS276:A.NZ/2
DC27:C.OP1/2 2.77 61:C/2 3.15 TYR283:A.N/2
DC27:C.OP1/2 2.77 61:C/2 3.22 LEU284:A.N/2
DA4:D.N3/2 2.85 66:D/2 3.41 LYS244:A.N/2
DA5:D.OP1/2 2.22 57:D/2 3.07 ARG243:A.O/2
DA5:D.OP1/2 3.04 377:A/2 2.22 LYS244:A.O/2
DA5:D.O3'/2 2.48 56:D/2 3.45 ARG241:A.NH1/2
DA5:D.N3/2 2.6 42:D/2 3.21 ARG241:A.NH1/2
DT22:D.OP1/2 2.37 64:D/2 3.1 ARG118:A.NH1/1
DA24:D.OP1/2 2.82 39:D/2 3.18 ARG179:B.NH2/2
DA24:D.OP1/2 2.53 46:D/2 2.59 THR200:B.O/2
DA24:D.OP1/2 2.53 46:D/2 2.6 LYS201:B.O/2
DA24:D.N7/2 2.88 442:B/2 2.68 HIS40:B.O/2
DA24:D.N6/2 3.03 442:B/2 2.68 HIS40:B.O/2
DA26:D.OP1/2 3.02 438:B/2 2.69 TYR283:B.OH/2
DC27:D.OP1/2 2.54 37:D/2 2.89 LYS276:B.NZ/2
DC27:D.OP1/2 2.54 37:D/2 2.99 GLN281:B.O/2
DC27:D.OP1/2 2.54 37:D/2 3.23 TYR283:B.N/2
DC27:D.N4/2 2.24 51:D/2 2.86 GLU262:B.OE1/2
DG28:D.OP1/2 2.97 377:B/2 2.78 GLY280:B.O/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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