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Nucleic atom dist Protein atom
DT3:C.O2/1 2.85 LYS244:B.NZ/1
DC6:C.OP1/1 2.96 ARG159:B.NH1/1
DC6:C.OP1/1 2.77 VAL242:B.N/1
DC6:C.OP2/1 2.85 GLN156:B.OE1/1
DC6:C.OP2/1 3.04 ARG159:B.NH2/1
DT7:C.OP2/1 3 SER257:B.N/1
DG10:C.N7/1 2.49 LYS43:B.NZ/1
DT11:C.OP2/1 2.62 SER47:B.OG/1
DT11:C.OP2/1 2.49 ARG50:B.NH1/1
DA12:C.OP1/1 2.5 ARG81:B.NH2/1
DA12:C.N3/1 3.33 ARG282:B.NH1/1
DA12:C.N3/1 3.22 ARG282:B.NH2/1
DT13:C.OP2/1 2.9 ALA84:B.N/1
DT13:C.OP2/1 2.63 THR87:B.OG1/1
DA14:C.OP1/1 2.99 LYS132:B.N/1
DA15:C.OP2/1 2.52 ARG326:B.NH2/1
DA15:C.N7/1 3.09 LYS86:B.NZ/1
DA15:C.N3/1 2.55 LYS201:B.NZ/1
DT16:C.OP1/1 3.13 ARG292:B.NE/1
DT16:C.OP1/1 2.47 ARG292:B.NH2/1
DT16:C.OP2/1 3.2 TRP315:B.NE1/1
DT16:C.O4'/1 2.9 LYS201:B.NZ/1
DG17:C.OP2/1 2.83 THR316:B.OG1/1
DT23:C.OP2/1 3.13 SER38:A.N/2
DT23:C.OP2/1 2.47 THR41:A.OG1/2
DA24:C.OP2/1 2.67 HIS40:A.ND1/2
DT25:C.OP1/1 3.23 ALA175:A.N/2
DA26:C.OP1/1 2.73 HIS289:A.N/2
DC27:C.OP1/1 2.65 TYR283:A.N/2
DG28:C.OP1/1 2.97 LYS276:A.NZ/2
DG28:C.N7/1 2.92 ARG259:A.NH2/2
DG28:C.O6/1 3.01 ARG259:A.NE/2
DC6:D.OP1/1 2.8 ARG159:A.NH1/1
DC6:D.OP1/1 2.9 VAL242:A.N/1
DC6:D.OP2/1 3.01 ARG159:A.NH2/1
DT7:D.OP2/1 3.17 SER257:A.N/1
DT7:D.OP2/1 2.69 SER257:A.OG/1
DT11:D.OP2/1 2.75 SER47:A.OG/1
DT11:D.OP2/1 3.38 ARG50:A.NE/1
DT11:D.OP2/1 2.68 ARG50:A.NH2/1
DA12:D.OP1/1 3.28 ARG81:A.NH2/1
DA12:D.N3/1 3.23 ARG282:A.NH2/1
DT13:D.OP2/1 2.88 ALA84:A.N/1
DT13:D.OP2/1 2.67 THR87:A.OG1/1
DT13:D.O4/1 3.06 GLN90:A.NE2/1
DA14:D.OP1/1 3.12 LYS132:A.N/1
DG15:D.OP1/1 2.6 TYR324:A.OH/1
DG15:D.O6/1 2.5 LYS86:A.NZ/1
DC16:D.OP1/1 2.93 ARG292:A.NH2/1
DC16:D.OP2/1 2.75 TRP315:A.NE1/1
DA19:D.OP1/1 2.87 ARG121:B.NH2/1
DT22:D.OP1/1 3.17 ARG101:B.NH2/1
DT22:D.OP1/1 3.35 ARG118:A.NH2/2
DT22:D.OP2/1 3.04 ARG101:B.NE/1
DT23:D.OP2/1 2.88 SER38:B.N/1
DT23:D.OP2/1 2.67 THR41:B.OG1/1
DA24:D.OP2/1 2.86 SER38:B.OG/1
DT25:D.OP1/1 2.95 ALA175:B.N/1
DA26:D.OP1/1 2.47 SER287:B.OG/1
DA26:D.OP1/1 3.18 HIS289:B.N/1
DA26:D.OP2/1 2.78 GLU262:B.OE2/1
DA26:D.OP2/1 2.96 GLY288:B.N/1
DA26:D.O4'/1 3.27 ARG282:B.NH1/1
DC27:D.OP1/1 2.75 TYR283:B.N/1
DG28:D.N7/1 2.91 ARG259:B.NH2/1
DG28:D.O6/1 2.7 ARG259:B.NE/1
DT33:D.O2/1 2.98 ARG243:B.NH1/1
DT3:C.O2/2 2.85 LYS244:B.NZ/2
DC6:C.OP1/2 2.96 ARG159:B.NH1/2
DC6:C.OP1/2 2.77 VAL242:B.N/2
DC6:C.OP2/2 2.85 GLN156:B.OE1/2
DC6:C.OP2/2 3.04 ARG159:B.NH2/2
DT7:C.OP2/2 3 SER257:B.N/2
DG10:C.N7/2 2.49 LYS43:B.NZ/2
DT11:C.OP2/2 2.62 SER47:B.OG/2
DT11:C.OP2/2 2.49 ARG50:B.NH1/2
DA12:C.OP1/2 2.5 ARG81:B.NH2/2
DA12:C.N3/2 3.33 ARG282:B.NH1/2
DA12:C.N3/2 3.22 ARG282:B.NH2/2
DT13:C.OP2/2 2.9 ALA84:B.N/2
DT13:C.OP2/2 2.63 THR87:B.OG1/2
DA14:C.OP1/2 2.99 LYS132:B.N/2
DA15:C.OP2/2 2.52 ARG326:B.NH2/2
DA15:C.N7/2 3.09 LYS86:B.NZ/2
DA15:C.N3/2 2.55 LYS201:B.NZ/2
DT16:C.OP1/2 3.13 ARG292:B.NE/2
DT16:C.OP1/2 2.47 ARG292:B.NH2/2
DT16:C.OP2/2 3.2 TRP315:B.NE1/2
DT16:C.O4'/2 2.9 LYS201:B.NZ/2
DG17:C.OP2/2 2.83 THR316:B.OG1/2
DT23:C.OP2/2 3.13 SER38:A.N/1
DT23:C.OP2/2 2.47 THR41:A.OG1/1
DA24:C.OP2/2 2.67 HIS40:A.ND1/1
DT25:C.OP1/2 3.23 ALA175:A.N/1
DA26:C.OP1/2 2.73 HIS289:A.N/1
DC27:C.OP1/2 2.65 TYR283:A.N/1
DG28:C.OP1/2 2.97 LYS276:A.NZ/1
DG28:C.N7/2 2.92 ARG259:A.NH2/1
DG28:C.O6/2 3.01 ARG259:A.NE/1
DC6:D.OP1/2 2.8 ARG159:A.NH1/2
DC6:D.OP1/2 2.9 VAL242:A.N/2
DC6:D.OP2/2 3.01 ARG159:A.NH2/2
DT7:D.OP2/2 3.17 SER257:A.N/2
DT7:D.OP2/2 2.69 SER257:A.OG/2
DT11:D.OP2/2 2.75 SER47:A.OG/2
DT11:D.OP2/2 3.38 ARG50:A.NE/2
DT11:D.OP2/2 2.68 ARG50:A.NH2/2
DA12:D.OP1/2 3.28 ARG81:A.NH2/2
DA12:D.N3/2 3.23 ARG282:A.NH2/2
DT13:D.OP2/2 2.88 ALA84:A.N/2
DT13:D.OP2/2 2.67 THR87:A.OG1/2
DT13:D.O4/2 3.06 GLN90:A.NE2/2
DA14:D.OP1/2 3.12 LYS132:A.N/2
DG15:D.OP1/2 2.6 TYR324:A.OH/2
DG15:D.O6/2 2.5 LYS86:A.NZ/2
DC16:D.OP1/2 2.93 ARG292:A.NH2/2
DC16:D.OP2/2 2.75 TRP315:A.NE1/2
DA19:D.OP1/2 2.87 ARG121:B.NH2/2
DT22:D.OP1/2 3.35 ARG118:A.NH2/1
DT22:D.OP1/2 3.17 ARG101:B.NH2/2
DT22:D.OP2/2 3.04 ARG101:B.NE/2
DT23:D.OP2/2 2.88 SER38:B.N/2
DT23:D.OP2/2 2.67 THR41:B.OG1/2
DA24:D.OP2/2 2.86 SER38:B.OG/2
DT25:D.OP1/2 2.95 ALA175:B.N/2
DA26:D.OP1/2 2.47 SER287:B.OG/2
DA26:D.OP1/2 3.18 HIS289:B.N/2
DA26:D.OP2/2 2.78 GLU262:B.OE2/2
DA26:D.OP2/2 2.96 GLY288:B.N/2
DA26:D.O4'/2 3.27 ARG282:B.NH1/2
DC27:D.OP1/2 2.75 TYR283:B.N/2
DG28:D.N7/2 2.91 ARG259:B.NH2/2
DG28:D.O6/2 2.7 ARG259:B.NE/2
DT33:D.O2/2 2.98 ARG243:B.NH1/2
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Nucleic atom d_n2w water d_p2w Protein atom
DA4:C.N3/1 2.9 385:B/1 2.82 LYS244:B.N/1
DA5:C.OP1/1 2.76 73:C/1 3.08 ARG243:B.O/1
DA5:C.OP1/1 2.88 437:B/1 2.85 LYS244:B.O/1
DA5:C.O3'/1 3.13 345:B/1 2.87 ARG241:B.NE/1
DA5:C.O3'/1 3.13 345:B/1 2.94 ARG241:B.NH2/1
DA5:C.N3/1 2.83 450:B/1 2.79 ARG241:B.NH2/1
DA12:C.OP2/1 2.94 493:B/1 2.53 SER51:B.OG/1
DA12:C.OP2/1 3.13 350:B/1 2.8 HIS91:B.NE2/1
DA14:C.OP2/1 2.76 51:C/1 3.05 LYS86:B.N/1
DA14:C.N7/1 2.95 403:B/1 2.8 LYS86:B.O/1
DA14:C.N6/1 2.99 403:B/1 2.8 LYS86:B.O/1
DA15:C.OP1/1 2.94 369:B/1 2.75 ALA134:B.N/1
DA15:C.N6/1 3.01 363:B/1 2.96 LYS86:B.NZ/1
DC22:C.OP1/1 2.56 65:C/1 2.92 ARG101:A.NE/2
DC22:C.OP1/1 2.56 65:C/1 2.94 ARG101:A.NH2/2
DC22:C.OP2/1 2.72 58:C/1 3.45 GLN94:A.NE2/2
DA24:C.N7/1 2.85 81:C/1 2.94 HIS40:A.O/2
DA24:C.N6/1 2.77 81:C/1 2.94 HIS40:A.O/2
DA26:C.N3/1 3.22 493:A/2 2.52 ARG282:A.NH2/2
DC27:C.OP1/1 3.04 385:A/2 2.66 LYS276:A.NZ/2
DC27:C.OP1/1 3.04 385:A/2 3.31 LEU284:A.N/2
DC27:C.OP2/1 3.03 38:C/1 2.36 GLU266:A.OE1/2
DC27:C.O4'/1 3.04 493:A/2 2.52 ARG282:A.NH2/2
DC27:C.N4/1 2.74 37:C/1 3.21 GLU262:A.OE2/2
DT32:C.O2/1 2.86 57:C/1 2.99 ARG241:A.NH2/2
DA4:D.N3/1 3.21 349:A/1 2.83 LYS244:A.N/1
DA5:D.OP1/1 2.75 36:D/1 3.18 VAL242:A.O/1
DA5:D.OP1/1 2.75 36:D/1 2.88 ARG243:A.O/1
DA5:D.OP1/1 2.99 442:A/1 2.43 LYS244:A.O/1
DA5:D.N3/1 2.83 88:D/1 3.17 ARG241:A.NH1/1
DA12:D.OP1/1 2.67 359:A/1 2.3 ARG81:A.NH2/1
DG15:D.OP1/1 3 345:A/1 2.71 ALA134:A.N/1
DG15:D.N7/1 2.75 69:D/1 2.81 LYS86:A.NZ/1
DC16:D.OP2/1 3.15 424:A/1 2.96 ARG292:A.NE/1
DC16:D.OP2/1 3.15 424:A/1 2.57 TYR324:A.OH/1
DT18:D.OP1/1 2.96 64:D/1 3.05 VAL204:A.N/1
DT22:D.OP1/1 2.84 110:D/1 3.24 ARG118:A.NH1/2
DA24:D.N7/1 2.78 56:D/1 2.91 HIS40:B.O/1
DA24:D.N6/1 2.99 56:D/1 2.91 HIS40:B.O/1
DT25:D.O3'/1 3.21 448:B/1 2.67 TYR283:B.OH/1
DT25:D.O4/1 2.84 55:D/1 2.99 HIS40:B.ND1/1
DA26:D.OP1/1 3.02 448:B/1 2.67 TYR283:B.OH/1
DA26:D.N3/1 3.11 507:B/1 2.67 ARG282:B.NH2/1
DC27:D.OP1/1 2.82 51:D/1 3.12 LEU284:B.N/1
DC27:D.OP2/1 2.9 486:B/1 2.89 TRP286:B.O/1
DC27:D.O4'/1 3.17 507:B/1 2.67 ARG282:B.NH2/1
DC27:D.N4/1 2.98 42:D/1 3.02 GLU262:B.OE1/1
DG28:D.OP2/1 2.88 63:D/1 3.1 ARG259:B.NH2/1
DA34:D.N3/1 2.83 91:D/1 2.97 ARG243:B.NH1/1
DT35:D.OP1/1 2.85 453:B/1 2.84 ASN245:B.OD1/1
DT35:D.OP1/1 2.58 44:D/1 2.74 ASN245:B.ND2/1
DA4:C.N3/2 2.9 385:B/2 2.82 LYS244:B.N/2
DA5:C.OP1/2 2.76 73:C/2 3.08 ARG243:B.O/2
DA5:C.OP1/2 2.88 437:B/2 2.85 LYS244:B.O/2
DA5:C.O3'/2 3.13 345:B/2 2.87 ARG241:B.NE/2
DA5:C.O3'/2 3.13 345:B/2 2.94 ARG241:B.NH2/2
DA5:C.N3/2 2.83 450:B/2 2.79 ARG241:B.NH2/2
DA12:C.OP2/2 2.94 493:B/2 2.53 SER51:B.OG/2
DA12:C.OP2/2 3.13 350:B/2 2.8 HIS91:B.NE2/2
DA14:C.OP2/2 2.76 51:C/2 3.05 LYS86:B.N/2
DA14:C.N7/2 2.95 403:B/2 2.8 LYS86:B.O/2
DA14:C.N6/2 2.99 403:B/2 2.8 LYS86:B.O/2
DA15:C.OP1/2 2.94 369:B/2 2.75 ALA134:B.N/2
DA15:C.N6/2 3.01 363:B/2 2.96 LYS86:B.NZ/2
DC22:C.OP1/2 2.56 65:C/2 2.92 ARG101:A.NE/1
DC22:C.OP1/2 2.56 65:C/2 2.94 ARG101:A.NH2/1
DC22:C.OP2/2 2.72 58:C/2 3.45 GLN94:A.NE2/1
DA24:C.N7/2 2.85 81:C/2 2.94 HIS40:A.O/1
DA24:C.N6/2 2.77 81:C/2 2.94 HIS40:A.O/1
DA26:C.N3/2 3.22 493:A/1 2.52 ARG282:A.NH2/1
DC27:C.OP1/2 3.04 385:A/1 2.66 LYS276:A.NZ/1
DC27:C.OP1/2 3.04 385:A/1 3.31 LEU284:A.N/1
DC27:C.OP2/2 3.03 38:C/2 2.36 GLU266:A.OE1/1
DC27:C.O4'/2 3.04 493:A/1 2.52 ARG282:A.NH2/1
DC27:C.N4/2 2.74 37:C/2 3.21 GLU262:A.OE2/1
DT32:C.O2/2 2.86 57:C/2 2.99 ARG241:A.NH2/1
DA4:D.N3/2 3.21 349:A/2 2.83 LYS244:A.N/2
DA5:D.OP1/2 2.75 36:D/2 3.18 VAL242:A.O/2
DA5:D.OP1/2 2.75 36:D/2 2.88 ARG243:A.O/2
DA5:D.OP1/2 2.99 442:A/2 2.43 LYS244:A.O/2
DA5:D.N3/2 2.83 88:D/2 3.17 ARG241:A.NH1/2
DA12:D.OP1/2 2.67 359:A/2 2.3 ARG81:A.NH2/2
DG15:D.OP1/2 3 345:A/2 2.71 ALA134:A.N/2
DG15:D.N7/2 2.75 69:D/2 2.81 LYS86:A.NZ/2
DC16:D.OP2/2 3.15 424:A/2 2.96 ARG292:A.NE/2
DC16:D.OP2/2 3.15 424:A/2 2.57 TYR324:A.OH/2
DT18:D.OP1/2 2.96 64:D/2 3.05 VAL204:A.N/2
DT22:D.OP1/2 2.84 110:D/2 3.24 ARG118:A.NH1/1
DA24:D.N7/2 2.78 56:D/2 2.91 HIS40:B.O/2
DA24:D.N6/2 2.99 56:D/2 2.91 HIS40:B.O/2
DT25:D.O3'/2 3.21 448:B/2 2.67 TYR283:B.OH/2
DT25:D.O4/2 2.84 55:D/2 2.99 HIS40:B.ND1/2
DA26:D.OP1/2 3.02 448:B/2 2.67 TYR283:B.OH/2
DA26:D.N3/2 3.11 507:B/2 2.67 ARG282:B.NH2/2
DC27:D.OP1/2 2.82 51:D/2 3.12 LEU284:B.N/2
DC27:D.OP2/2 2.9 486:B/2 2.89 TRP286:B.O/2
DC27:D.O4'/2 3.17 507:B/2 2.67 ARG282:B.NH2/2
DC27:D.N4/2 2.98 42:D/2 3.02 GLU262:B.OE1/2
DG28:D.OP2/2 2.88 63:D/2 3.1 ARG259:B.NH2/2
DA34:D.N3/2 2.83 91:D/2 2.97 ARG243:B.NH1/2
DT35:D.OP1/2 2.85 453:B/2 2.84 ASN245:B.OD1/2
DT35:D.OP1/2 2.58 44:D/2 2.74 ASN245:B.ND2/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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