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Nucleic atom dist Protein atom
DT1804:H.OP2/1 2.74 LYS1339:B.NZ/1
DG1805:H.OP1/1 2.8 THR1301:B.N/1
DG1805:H.OP1/1 2.93 THR1301:B.OG1/1
DG1806:H.OP2/1 2.87 GLY1299:B.N/1
DA1807:H.OP1/1 3.17 ARG1298:B.NH1/1
DA1807:H.OP2/1 3.18 SER1297:B.N/1
DG1810:H.OP1/1 2.8 LYS1193:B.NZ/1
DT1811:H.OP1/1 2.79 GLY1187:B.N/1
DT1811:H.OP1/1 2.69 THR1190:B.OG1/1
DA1812:H.OP1/1 2.94 GLY1185:B.N/1
DT1908:J.OP1/1 3.36 THR1250:B.N/1
DT1908:J.OP2/1 3.14 ARG1332:B.NH2/1
DA1909:J.OP2/1 3.21 ILE1248:B.N/1
DC1910:J.OP2/1 3.32 GLY1246:B.N/1
DC1910:J.OP2/1 2.88 ARG1336:B.NH2/1
DC1911:J.OP1/1 3.06 LYS1243:B.N/1
DC1911:J.OP2/1 2.82 SER1244:B.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DDG1813:H.OP1/1 2.54 1501:B/1 2.49 ASP1105:B.OD1/1
DDG1813:H.OP1/1 2.54 1501:B/1 2.44 ASP1105:B.OD2/1
DA1909:J.OP2/1 3.18 42:B/1 2.57 ARG1336:B.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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