Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DT23:E.OP1/1 3.16 LYS551:D.NZ/1
DG24:E.OP1/1 2.95 THR550:D.OG1/1
DG24:E.OP1/1 2.66 THR552:D.OG1/1
DA25:E.OP1/1 2.69 THR556:D.N/1
DA25:E.OP1/1 2.62 THR556:D.OG1/1
DA25:E.O5'/1 3.14 THR556:D.OG1/1
DC26:E.OP1/1 3.22 ARG578:D.NE/1
DC26:E.OP1/1 3 ARG578:D.NH2/1
DC26:E.OP2/1 3.39 ALA558:D.N/1
DT27:E.O2/1 2.61 ASN625:D.ND2/1
DC28:E.OP1/1 2.8 ILE628:D.N/1
DC28:E.OP1/1 2.82 ARG629:D.N/1
DC4:F.OP1/1 3.05 ARG789:D.NE/1
DG5:F.OP1/1 3.01 ARG771:D.NH1/1
DA6:F.OP1/1 2.75 GLN612:D.N/1
DG7:F.OP1/1 3.2 SER617:D.OG/1
DT8:F.OP1/1 2.68 GLU620:D.N/1
DG11:F.OP1/1 3.22 ASN527:D.ND2/1
DG12:F.OP1/1 2.88 SER530:D.OG/1
DG12:F.OP1/1 3 GLN533:D.NE2/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DC26:E.OP1/1 2.98 55:D/1 2.9 GLN579:D.OE1/1
DC28:E.OP1/1 2.69 46:E/1 3.3 ARG629:D.N/1
DC28:E.OP1/1 2.69 46:E/1 2.99 LEU630:D.N/1
DDG29:E.OP1/1 3.06 240:D/1 2.82 ARG637:D.NH2/1
DDG29:E.OP1/1 3.06 240:D/1 2.82 GLU831:D.OE2/1
DC4:F.O3'/1 2.91 1:D/1 2.89 ASN793:D.OD1/1
DC4:F.O3'/1 2.91 1:D/1 3.12 THR794:D.OG1/1
DC4:F.O2/1 3.04 27:D/1 2.7 GLN797:D.NE2/1
DG5:F.N2/1 3.14 6:D/1 2.94 ARG615:D.NH1/1
DG5:F.N3/1 3.01 6:D/1 2.94 ARG615:D.NH1/1
DA6:F.OP1/1 2.64 43:F/1 3.43 GLN612:D.NE2/1
DA6:F.N3/1 2.57 21:F/1 3 ASN622:D.ND2/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text