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Nucleic atom dist Protein atom
DT23:B.OP1/1 3.01 LYS551:A.NZ/1
DG24:B.OP1/1 2.83 THR550:A.OG1/1
DG24:B.OP1/1 2.57 THR552:A.OG1/1
DA25:B.OP1/1 2.79 THR556:A.N/1
DA25:B.OP1/1 2.64 THR556:A.OG1/1
DA25:B.O3'/1 2.94 ARG578:A.NH1/1
DC26:B.OP1/1 3.14 ARG578:A.NH1/1
DC26:B.OP2/1 3.28 ALA558:A.N/1
DT27:B.O2/1 3.18 ASN625:A.ND2/1
DC28:B.OP1/1 2.74 ILE628:A.N/1
DC28:B.OP1/1 2.85 ARG629:A.N/1
DDG29:B.OP2/1 3.01 ARG629:A.NE/1
DDG29:B.OP2/1 3.04 ARG629:A.NH2/1
DT2:C.N3/1 3.44 ARG729:A.NH2/1
DG3:C.OP2/1 2.79 SER717:A.N/1
DG3:C.OP2/1 2.55 SER717:A.OG/1
DG3:C.O3'/1 2.97 ARG789:A.NE/1
DC4:C.OP1/1 3 ARG789:A.NE/1
DG5:C.OP1/1 2.84 ARG771:A.NH1/1
DG5:C.O4'/1 3.08 GLN797:A.NE2/1
DA6:C.OP1/1 2.79 GLN612:A.N/1
DG7:C.OP1/1 2.95 SER617:A.OG/1
DG7:C.O4'/1 2.85 ASN622:A.ND2/1
DT8:C.OP1/1 2.85 GLU620:A.N/1
DG11:C.OP1/1 2.92 ASN527:A.ND2/1
DG12:C.OP1/1 2.63 SER530:A.OG/1
DG12:C.OP1/1 3.14 GLN533:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA25:B.OP2/1 2.55 3653:B/1 2.58 SER555:A.OG/1
DC26:B.OP1/1 2.68 3137:B/1 2.92 LEU575:A.O/1
DC28:B.OP1/1 2.77 3183:B/1 2.87 LEU630:A.N/1
DC28:B.O2/1 2.67 3012:B/1 2.77 GLN624:A.O/1
DC28:B.O2/1 2.67 3012:B/1 2.88 HIS829:A.NE2/1
DDG29:B.OP1/1 3.15 3242:A/1 2.79 ARG637:A.NH2/1
DG3:C.N7/1 2.84 3895:A/1 2.52 ALA707:A.O/1
DC4:C.OP1/1 2.65 3222:C/1 2.77 PHE786:A.O/1
DC4:C.O3'/1 2.84 3048:A/1 2.78 ASN793:A.OD1/1
DC4:C.O3'/1 2.84 3048:A/1 2.97 THR794:A.OG1/1
DG5:C.N2/1 3.04 3037:C/1 2.89 ARG615:A.NH1/1
DG5:C.N3/1 2.79 3037:C/1 2.89 ARG615:A.NH1/1
DA6:C.OP1/1 2.59 3198:C/1 3.31 GLN612:A.NE2/1
DA6:C.N3/1 2.79 3088:C/1 2.92 ASN622:A.ND2/1
DG7:C.N2/1 2.9 3095:C/1 3.12 ASN625:A.ND2/1
DT8:C.O4'/1 2.82 3095:C/1 3.12 ASN625:A.ND2/1
DC9:C.OP1/1 2.97 3254:A/1 2.66 GLY590:A.O/1
DA10:C.OP1/1 3.1 3516:A/1 2.92 SER585:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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