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Nucleic atom dist Protein atom
DT4:E.OP1/1 2.4 ARG29:D.NH2/1
DG5:E.OP2/1 2.77 ALA28:D.N/1
DT6:E.OP1/1 2.9 ARG27:D.NH1/1
DT6:E.OP2/1 2.52 SER42:D.OG/1
DG9:E.OP1/1 2.96 ARG29:A.NH2/1
DG9:E.OP2/1 3.05 ARG29:A.NH1/1
DC10:E.OP2/1 3 ALA28:A.N/1
DC10:E.O5'/1 3.07 ARG27:A.NH2/1
DA11:E.OP1/1 3.41 ARG27:A.NH1/1
DA11:E.OP2/1 2.85 SER42:A.OG/1
DA13:E.OP1/1 2.8 ARG50:C.NH2/1
DA13:E.OP2/1 2.98 ARG50:C.NH1/1
DG14:E.OP2/1 3.08 ARG47:C.NH2/1
DG15:E.OP1/1 2.72 ASN2:C.OD1/1
DG15:E.OP1/1 2.78 ASN2:C.ND2/1
DG15:E.OP2/1 3.08 THR7:C.OG1/1
DG15:E.OP2/1 3 GLN36:C.NE2/1
DC16:E.OP2/1 2.99 SER37:C.N/1
DC16:E.OP2/1 3.04 SER37:C.OG/1
DC16:E.OP2/1 2.62 THR40:C.OG1/1
DG18:E.OP1/1 2.93 ARG50:B.NH2/1
DG18:E.OP2/1 3.11 ARG50:B.NH1/1
DC19:E.OP2/1 3.21 ARG47:B.NE/1
DC19:E.OP2/1 2.97 ARG47:B.NH2/1
DC19:E.O5'/1 3.43 ARG47:B.NH2/1
DC20:E.OP1/1 2.52 ASN2:B.OD1/1
DC20:E.OP2/1 2.83 THR7:B.OG1/1
DC20:E.OP2/1 3.08 GLN36:B.NE2/1
DC20:E.N4/1 2.7 GLN43:B.OE1/1
DC21:E.OP2/1 3.27 SER37:B.N/1
DC21:E.OP2/1 2.9 SER37:B.OG/1
DC21:E.OP2/1 2.49 THR40:B.OG1/1
DA7:F.OP1/1 2.33 ARG29:B.NH2/1
DA8:F.OP1/1 3.3 ARG27:B.NH2/1
DA8:F.OP2/1 2.97 ALA28:B.N/1
DG12:F.OP1/1 2.85 ARG29:C.NH2/1
DG12:F.OP2/1 2.68 ARG29:C.NH1/1
DG13:F.OP1/1 2.99 ARG27:C.NH2/1
DG13:F.OP2/1 2.85 ALA28:C.N/1
DG14:F.OP1/1 3.07 ARG27:C.NH1/1
DA16:F.OP1/1 2.71 ARG50:A.NH2/1
DA16:F.OP2/1 3.05 ARG50:A.NH1/1
DG17:F.OP2/1 3.1 ARG47:A.NE/1
DG17:F.OP2/1 2.86 ARG47:A.NH2/1
DC18:F.OP1/1 2.71 ASN2:A.ND2/1
DC18:F.OP2/1 3.13 THR7:A.OG1/1
DC18:F.OP2/1 2.84 GLN36:A.NE2/1
DC18:F.N4/1 3.07 GLN43:A.OE1/1
DC19:F.OP2/1 2.83 SER37:A.N/1
DC19:F.OP2/1 2.87 THR40:A.OG1/1
DG21:F.OP1/1 2.81 ARG50:D.NH2/1
DG21:F.OP2/1 3.1 ARG50:D.NH1/1
DT22:F.OP2/1 3.08 ARG47:D.NE/1
DT22:F.OP2/1 2.63 ARG47:D.NH2/1
DG23:F.OP1/1 2.75 ASN2:D.OD1/1
DG23:F.OP2/1 2.57 THR7:D.OG1/1
DG23:F.OP2/1 3.15 GLN36:D.NE2/1
DC24:F.OP2/1 3.05 SER37:D.N/1
DC24:F.OP2/1 2.92 SER37:D.OG/1
DC24:F.OP2/1 2.4 THR40:D.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG5:E.OP1/1 2.2 57:E/1 3.2 ARG27:D.N/1
DG5:E.OP1/1 2.2 57:E/1 3.27 ARG27:D.NE/1
DG5:E.OP1/1 2.2 57:E/1 3.38 ARG27:D.NH2/1
DG5:E.OP1/1 2.2 57:E/1 2.51 ARG60:D.O/1
DG9:E.N2/1 3.08 52:E/1 3.19 ARG60:A.NH2/1
DG9:E.N3/1 2.73 2014:A/1 2.72 ARG60:A.NH1/1
DC10:E.OP1/1 2.73 2003:A/1 2.95 ARG27:A.N/1
DC10:E.OP1/1 2.73 2003:A/1 2.96 ARG27:A.NE/1
DC10:E.OP1/1 2.73 2003:A/1 2.52 ARG60:A.O/1
DC10:E.O3'/1 3.2 46:E/1 2.88 ARG27:A.NH2/1
DA11:E.OP1/1 2.72 46:E/1 2.88 ARG27:A.NH2/1
DG14:E.OP1/1 2.79 41:E/1 3.09 ASN2:C.ND2/1
DG14:E.OP1/1 2.79 41:E/1 2.99 THR7:C.N/1
DG14:E.OP1/1 2.77 2016:C/1 2.94 THR8:C.N/1
DG14:E.OP1/1 2.77 2016:C/1 2.62 THR8:C.OG1/1
DG15:E.OP2/1 2.54 51:E/1 2.93 TYR11:C.OH/1
DG15:E.OP2/1 2.54 51:E/1 2.94 GLN36:C.OE1/1
DG15:E.OP2/1 2.54 51:E/1 2.83 THR44:C.OG1/1
DC19:E.OP1/1 2.96 2002:A/1 2.76 MET1:A.N/1
DC19:E.OP1/1 2.9 1007:B/1 3.07 ASP6:B.OD2/1
DC19:E.OP1/1 2.96 2002:A/1 3.16 THR7:B.N/1
DC19:E.OP1/1 2.9 1007:B/1 3.05 THR8:B.N/1
DC19:E.OP1/1 2.9 1007:B/1 2.68 THR8:B.OG1/1
DC20:E.OP2/1 2.52 34:E/1 2.71 THR44:B.OG1/1
DC21:E.N4/1 2.83 1010:B/1 2.75 PRO39:B.O/1
DA6:F.N3/1 2.84 46:F/1 3.16 ARG60:B.NH2/1
DA7:F.O4'/1 3.04 46:F/1 3.16 ARG60:B.NH2/1
DA8:F.OP1/1 2.71 39:F/1 2.73 ARG27:B.N/1
DA8:F.OP1/1 2.71 39:F/1 2.9 ARG27:B.NE/1
DA8:F.OP1/1 2.71 39:F/1 2.75 ARG60:B.O/1
DG12:F.N3/1 2.88 2014:C/1 2.37 ARG60:C.NH1/1
DG13:F.OP1/1 2.83 2009:C/1 2.83 ARG27:C.N/1
DG13:F.OP1/1 2.83 2009:C/1 2.76 ARG27:C.NE/1
DG13:F.OP1/1 2.83 2009:C/1 2.74 ARG60:C.O/1
DG13:F.O6/1 2.91 1017:B/1 2.89 GLN43:B.NE2/1
DG14:F.OP1/1 2.8 35:F/1 2.86 ARG27:C.NH2/1
DG17:F.OP1/1 3.09 2007:A/1 3.03 THR7:A.N/1
DC18:F.OP2/1 2.81 34:F/1 2.87 TYR11:A.OH/1
DC18:F.OP2/1 2.81 34:F/1 3.08 GLN36:A.OE1/1
DC18:F.OP2/1 2.81 34:F/1 2.81 THR44:A.OG1/1
DC19:F.N4/1 2.84 2025:A/1 2.48 PRO39:A.O/1
DC19:F.N4/1 2.84 2025:A/1 2.7 GLN43:A.OE1/1
DT22:F.OP1/1 3.12 2008:C/1 2.77 MET1:C.N/1
DT22:F.OP2/1 2.98 40:F/1 3.32 ARG47:D.NE/1
DG23:F.OP2/1 2.77 2002:D/1 2.57 THR44:D.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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