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Nucleic atom dist Protein atom
DT0:N.O5'/1 3.3 ARG512:B.NH2/1
U1:P.O3'/1 2.85 LYS323:A.NZ/1
U1:P.O2'/1 2.29 ARG320:A.NH2/1
U1:P.O2'/1 2.55 LYS323:A.NZ/1
U1:P.O2/1 3.29 ARG320:A.NH2/1
A7:P.O3'/1 3.19 GLN776:B.NE2/1
G8:P.OP1/1 3.11 GLN776:B.NE2/1
A9:P.O2'/1 3.12 ARG446:A.NH2/1
A9:P.O2'/1 2.85 ASP485:A.OD1/1
DT16:T.OP1/1 2.4 LYS330:A.NZ/1
DT18:T.OP1/1 2.54 ARG337:A.NH1/1
DT18:T.OP1/1 3.33 ARG839:A.NH1/1
DG24:T.OP1/1 2.97 SER1123:B.N/1
DG24:T.OP2/1 2.92 SER1123:B.OG/1
DG24:T.O3'/1 2.77 ARG942:B.NH1/1
DT25:T.OP1/1 3.35 ARG857:B.NH2/1
DC26:T.OP1/1 2.85 THR791:B.OG1/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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