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Nucleic atom dist Protein atom
DA11:I.OP2/1 3.27 LYS874:C.NZ/1
DA19:I.OP1/1 2.97 SER1253:D.N/1
DT20:I.OP1/1 3.28 ILE1251:D.N/1
DC26:I.O4'/1 2.6 ARG1228:D.NH2/1
DC26:I.O2/1 2.43 ARG1228:D.NH2/1
DA27:I.O4'/1 2.69 ARG1228:D.NH1/1
DA27:I.N3/1 3.06 ARG1228:D.NH1/1
DA30:I.OP2/1 3.01 ARG832:C.NH1/1
DG31:I.OP1/1 2.86 ARG817:C.N/1
DG31:I.OP2/1 3.24 ARG817:C.NE/1
DT32:I.OP2/1 3.12 LYS1322:D.NZ/1
DG39:I.O3'/1 3.1 THR1285:D.OG1/1
DG40:I.OP1/1 2.99 THR1285:D.N/1
DG40:I.OP2/1 3.15 SER1284:D.N/1
DA41:I.OP2/1 3.29 LYS77:B.NZ/1
DA41:I.OP2/1 3.05 ARG1283:D.NH2/1
DC50:I.OP2/1 3.22 SER486:A.N/1
DA51:I.OP1/1 2.93 ARG472:A.NH1/1
DA51:I.OP1/1 2.82 PHE484:A.N/1
DA51:I.OP2/1 3.02 ARG472:A.NH2/1
DC60:I.OP1/1 2.72 ARG36:B.NH2/1
DC60:I.OP2/1 3.02 ARG36:B.NH1/1
DG70:I.OP1/1 2.85 VAL517:A.N/1
DG70:I.OP1/1 2.71 THR518:A.OG1/1
DT80:I.OP2/1 3.07 GLY248:F.N/1
DG81:I.OP1/1 2.76 ILE246:F.N/1
DG81:I.OP2/1 2.56 ARG235:F.NH1/1
DG81:I.O3'/1 3.22 GLY644:E.N/1
DA82:I.OP1/1 2.78 GLY644:E.N/1
DA82:I.OP1/1 2.89 VAL646:E.N/1
DA82:I.OP1/1 3.1 ALA647:E.N/1
DA82:I.N3/1 3.26 ARG640:E.NH1/1
DA83:I.OP1/1 2.8 TYR641:E.N/1
DA83:I.O4'/1 3.22 ARG640:E.NH2/1
DT90:I.OP2/1 2.43 ARG669:E.NH2/1
DT91:I.OP1/1 2.91 LYS664:E.N/1
DT91:I.OP2/1 2.87 LEU665:E.N/1
DC101:I.OP1/1 2.82 LYS279:F.N/1
DC101:I.OP1/1 2.81 THR280:F.OG1/1
DA111:I.OP1/1 2.82 ALA1045:G.N/1
DT112:I.OP1/1 2.47 ARG1035:G.NH1/1
DT112:I.OP1/1 3.17 VAL1043:G.N/1
DT112:I.OP2/1 2.41 ARG1035:G.NH2/1
DG122:I.OP1/1 2.94 ARG1029:G.NH2/1
DG122:I.OP1/1 3.19 SER1433:H.N/1
DG122:I.OP1/1 3.13 SER1433:H.O/1
DC132:I.OP1/1 3.14 ARG1077:G.N/1
DC132:I.OP2/1 3.2 THR1076:G.N/1
DG144:I.OP1/1 2.86 ARG442:A.N/1
DG144:I.OP1/1 2.59 THR445:A.OG1/1
DA165:J.OP1/1 2.78 SER1453:H.N/1
DA174:J.O3'/1 3.15 ARG1430:H.NH1/1
DG177:J.OP1/1 2.99 ARG1017:G.N/1
DG177:J.OP2/1 3.24 ARG1017:G.NE/1
DG185:J.O4'/1 3.31 ARG1042:G.NH1/1
DG186:J.OP1/1 2.98 THR1485:H.N/1
DG186:J.OP2/1 3.01 SER1484:H.N/1
DC196:J.OP2/1 3.26 SER686:E.N/1
DA197:J.OP1/1 2.98 ARG672:E.NH1/1
DA197:J.OP1/1 2.82 PHE684:E.N/1
DA197:J.OP2/1 3 ARG672:E.NH2/1
DA207:J.OP1/1 2.75 ARG236:F.NH2/1
DA207:J.OP2/1 3.05 ARG236:F.NH1/1
DC215:J.OP1/1 2.84 ARG642:E.NE/1
DC215:J.OP1/1 2.9 ARG642:E.NH2/1
DG217:J.OP1/1 2.88 VAL717:E.N/1
DG217:J.OP1/1 2.59 THR718:E.OG1/1
DG227:J.OP2/1 3.3 GLY48:B.N/1
DA228:J.OP1/1 2.74 ILE46:B.N/1
DA228:J.OP2/1 2.68 ARG35:B.NH2/1
DA228:J.O3'/1 3.22 GLY444:A.N/1
DA229:J.OP1/1 3.05 GLY444:A.N/1
DA229:J.OP1/1 2.89 VAL446:A.N/1
DA229:J.OP1/1 3 ALA447:A.N/1
DA229:J.N3/1 2.71 ARG440:A.NH2/1
DC230:J.OP1/1 2.97 TYR441:A.N/1
DT237:J.OP1/1 3.09 ARG469:A.NH1/1
DT237:J.OP1/1 2.77 ARG469:A.NH2/1
DT237:J.OP1/1 2.44 ARG23:B.NH1/1
DT237:J.O3'/1 2.66 ARG463:A.NH2/1
DT238:J.OP1/1 3.14 LYS464:A.N/1
DT238:J.OP2/1 2.96 LEU465:A.N/1
DA245:J.O3'/1 3.35 ARG483:A.NE/1
DC247:J.OP1/1 2.88 LYS79:B.N/1
DC247:J.OP1/1 2.62 THR80:B.OG1/1
DA257:J.OP1/1 2.92 ALA845:C.N/1
DT258:J.OP1/1 3.42 VAL843:C.N/1
DT258:J.OP2/1 2.96 ARG835:C.NH1/1
DT258:J.OP2/1 2.83 ARG835:C.NH2/1
DG268:J.OP1/1 3.07 ARG829:C.NH1/1
DG268:J.OP1/1 2.8 ARG829:C.NH2/1
DG268:J.OP1/1 3.04 SER1233:D.N/1
DG268:J.OP1/1 3.08 SER1233:D.O/1
DG268:J.N2/1 2.81 ARG1228:D.NH2/1
DT269:J.OP1/1 3.27 LYS1229:D.O/1
DT269:J.OP1/1 2.92 LYS1231:D.N/1
DC278:J.OP1/1 3.18 THR876:C.N/1
DC278:J.OP1/1 2.99 ARG877:C.N/1
DC278:J.OP2/1 3.13 THR876:C.N/1
DG290:J.OP1/1 2.83 ARG642:E.N/1
DG290:J.OP1/1 2.6 THR645:E.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA19:I.OP1/1 2.74 452:I/1 3.27 LYS1254:D.N/1
DG31:I.OP1/1 2.93 398:I/1 3.2 SER818:C.N/1
DG31:I.OP1/1 2.93 398:I/1 3.07 SER818:C.OG/1
DG31:I.OP1/1 2.93 398:I/1 3.25 GLY828:C.N/1
DA41:I.OP1/1 2.73 585:D/1 2.62 ARG1283:D.NE/1
DC50:I.OP2/1 2.93 539:A/1 2.89 SER486:A.OG/1
DC50:I.OP2/1 2.93 539:A/1 2.94 SER487:A.N/1
DC50:I.OP2/1 2.93 539:A/1 3.04 SER487:A.OG/1
DG81:I.OP1/1 2.31 466:I/1 3.14 ARG235:F.NH1/1
DG81:I.OP1/1 2.31 466:I/1 2.57 ARG239:F.NH2/1
DG81:I.OP1/1 2.31 466:I/1 3.17 LYS244:F.O/1
DG81:I.OP2/1 2.82 320:F/1 2.54 ILE246:F.O/1
DG81:I.OP2/1 2.82 320:F/1 2.5 TYR251:F.OH/1
DA82:I.OP2/1 2.53 384:I/1 2.96 ARG239:F.NH2/1
DA83:I.OP1/1 2.67 603:I/1 2.76 HIS639:E.ND1/1
DT91:I.OP1/1 2.61 435:I/1 2.64 ARG663:E.NH2/1
DG122:I.OP2/1 2.75 474:H/1 2.57 SER1433:H.O/1
DG122:I.OP2/1 2.75 474:H/1 3.14 ILE1436:H.N/1
DC132:I.OP1/1 2.69 370:G/1 2.59 ARG1077:G.O/1
DC206:J.OP1/1 2.87 555:J/1 3.02 ARG663:E.NH1/1
DC206:J.OP1/1 2.87 555:J/1 3.19 ARG663:E.NH2/1
DA207:J.OP1/1 2.84 411:F/1 2.5 THR230:F.OG1/1
DT208:J.OP2/1 2.54 321:J/1 2.87 LYS231:F.N/1
DA218:J.OP2/1 2.33 449:J/1 3.03 LYS515:A.NZ/1
DA228:J.OP1/1 2.46 475:J/1 3.05 ARG35:B.NH1/1
DA228:J.OP1/1 2.46 475:J/1 2.51 ARG39:B.NH2/1
DA228:J.OP1/1 2.46 475:J/1 2.7 LYS44:B.O/1
DA228:J.OP2/1 2.88 451:B/1 2.54 ILE46:B.O/1
DA228:J.OP2/1 2.88 451:B/1 2.65 TYR51:B.OH/1
DG267:J.OP1/1 2.27 383:J/1 2.49 TYR1237:D.OH/1
DG268:J.OP2/1 2.75 356:D/1 2.73 SER1233:D.O/1
DG268:J.OP2/1 2.75 356:D/1 3.02 ILE1236:D.N/1
DC278:J.OP1/1 2.62 388:C/1 2.6 ARG877:C.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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