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Nucleic atom dist Protein atom
DA2:C.OP1/1 2.71 TYR177:B.N/1
DA2:C.OP2/1 2.75 SER176:B.OG/1
DC3:C.OP1/1 3.43 HIS124:B.ND1/1
DC3:C.OP1/1 2.78 LEU179:B.N/1
DC3:C.O4'/1 2.96 ASN125:B.ND2/1
DG4:C.O3'/1 2.51 GLU20:B.OE2/1
DG4:C.O3'/1 2.99 ALA21:B.N/1
DG4:C.N2/1 3.05 SER78:B.OG/1
DG1:D.N7/1 3 ARG128:A.NH1/1
DG1:D.N7/1 2.93 ARG128:A.NH2/1
DG1:D.O6/1 3.01 ARG128:A.NH2/1
DA2:D.OP1/1 2.64 TYR177:A.N/1
DA2:D.OP2/1 2.93 SER176:A.OG/1
DC3:D.OP1/1 3.33 HIS124:A.ND1/1
DC3:D.OP1/1 2.78 LEU179:A.N/1
DC3:D.O4'/1 2.92 ASN125:A.ND2/1
DG4:D.O3'/1 2.75 GLU20:A.OE2/1
DG4:D.O3'/1 2.9 ALA21:A.N/1
DG4:D.N2/1 2.78 SER78:A.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA2:C.N3/1 2.6 239:C/1 3.01 ASN125:B.ND2/1
DG4:C.OP1/1 2.41 97:C/1 2.84 GLU20:B.OE1/1
DG4:C.OP1/1 2.41 97:C/1 2.91 GLU20:B.OE2/1
DG4:C.N2/1 3.13 335:B/1 3 GLY80:B.N/1
DA2:D.N3/1 2.69 181:D/1 2.85 ASN125:A.ND2/1
DG4:D.N2/1 3.46 427:A/1 2.85 LEU24:A.N/1
DG4:D.N2/1 3.14 492:A/1 2.73 GLY80:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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