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Nucleic atom dist Protein atom
DA2:I.O5'/1 2.89 LYS73:C.NZ/1
DC4:I.OP1/1 2.75 LYS363:C.NZ/1
3DR6:I.OP2/1 2.8 SER360:C.OG/1
3DR6:I.OP2/1 3.34 ILE362:C.N/1
DT9:I.OP1/1 2.72 GLY393:C.N/1
DA10:I.OP1/1 2.78 LYS705:C.NZ/1
DT11:I.O4'/1 3.03 ARG707:C.NH1/1
DA13:I.OP2/1 2.81 LYS878:C.NZ/1
DC14:I.OP1/1 3.28 LYS874:C.NZ/1
DA15:I.OP1/1 3.24 LYS844:C.NZ/1
DG16:I.OP1/1 2.78 LYS800:C.N/1
DC109:J.OP1/1 3 LYS790:C.NZ/1
DC109:J.OP1/1 2.51 TYR791:C.OH/1
DA110:J.OP1/1 3.06 SER784:C.O/1
DA110:J.OP1/1 2.82 HIS804:C.NE2/1
DA110:J.OP2/1 2.87 ASN786:C.ND2/1
DT111:J.OP2/1 2.7 SER784:C.OG/1
DA112:J.OP1/1 2.82 SER735:C.N/1
DA112:J.OP2/1 2.54 ASN284:C.ND2/1
DA113:J.OP1/1 2.77 GLY729:C.N/1
DG114:J.OP1/1 3.14 TYR708:C.OH/1
DG114:J.O3'/1 3.06 ASP623:C.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA10:I.OP1/1 2.78 1026:C/1 3.18 ALA394:C.O/1
DA10:I.OP1/1 2.78 1026:C/1 2.59 VAL396:C.N/1
DT11:I.OP1/1 2.85 1021:C/1 2.82 LYS705:C.N/1
DG12:I.OP1/1 2.88 818:I/1 2.97 THR703:C.OG1/1
DA13:I.OP1/1 2.47 813:I/1 2.63 LYS874:C.O/1
DA13:I.OP2/1 2.62 814:I/1 3.32 LYS878:C.NZ/1
DA15:I.OP1/1 2.7 808:I/1 2.87 ARG806:C.NE/1
DA15:I.OP1/1 2.9 1080:C/1 2.8 ARG806:C.NH2/1
DG16:I.OP1/1 2.72 949:C/1 2.51 GLY798:C.O/1
DG16:I.OP1/1 2.72 949:C/1 3.21 LYS800:C.N/1
DG16:I.OP1/1 2.72 949:C/1 3.39 CYS801:C.N/1
DA110:J.OP1/1 3.04 984:C/1 2.58 ASN786:C.O/1
DT111:J.OP2/1 2.71 121:J/1 3.1 ASN284:C.ND2/1
DT111:J.O5'/1 2.98 121:J/1 3.1 ASN284:C.ND2/1
DA113:J.OP1/1 3.14 1113:C/1 3.05 GLN733:C.NE2/1
DA113:J.O3'/1 3.06 1006:C/1 2.73 TYR619:C.OH/1
DA113:J.O3'/1 3.06 1006:C/1 2.29 ASP621:C.OD2/1
DG114:J.OP1/1 2.69 1006:C/1 2.73 TYR619:C.OH/1
DG114:J.OP1/1 2.69 1006:C/1 2.29 ASP621:C.OD2/1
DG114:J.OP1/1 2.62 131:J/1 2.66 TYR626:C.OH/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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