Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
3DR3:T.O3'/1 3.18 ASN572:A.ND2/1
DC4:T.OP1/1 3.13 ASN572:A.ND2/1
DT6:T.OP1/1 3.19 GLY393:A.N/1
DA7:T.OP1/1 2.98 LYS705:A.NZ/1
DG9:T.OP1/1 3.25 ARG707:A.NH1/1
DC11:T.OP1/1 2.7 LYS874:A.NZ/1
DA12:T.OP1/1 2.95 LYS844:A.NZ/1
DG13:T.OP1/1 2.61 LYS800:A.N/1
DC9:P.OP1/1 2.96 TYR791:A.OH/1
DA10:P.OP1/1 3.04 HIS804:A.NE2/1
DA10:P.OP2/1 3.2 ASN786:A.OD1/1
DT11:P.OP2/1 2.7 SER784:A.OG/1
DA12:P.OP1/1 2.68 SER735:A.N/1
DA12:P.OP2/1 2.52 ASN284:A.ND2/1
DA13:P.OP1/1 2.94 GLY729:A.N/1
DA13:P.N3/1 2.84 LYS706:A.NZ/1
DDG14:P.OP1/1 2.6 TYR708:A.OH/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DC4:T.O2/1 2.69 47:T/1 2.71 TYR567:A.OH/1
DT5:T.O4'/1 2.63 47:T/1 2.71 TYR567:A.OH/1
DT8:T.OP1/1 3.01 1211:A/1 2.73 GLU398:A.OE2/1
DT8:T.OP1/1 3.01 1211:A/1 2.78 LYS705:A.N/1
DA10:T.OP1/1 2.82 40:T/1 2.85 LYS874:A.O/1
DA10:P.N3/1 3.05 911:A/1 2.75 LYS734:A.NZ/1
DA12:P.OP1/1 2.62 18:P/1 2.7 GLN733:A.O/1
DA13:P.O3'/1 2.63 29:P/1 2.98 TYR619:A.OH/1
DA13:P.O3'/1 2.63 29:P/1 2.66 ASP621:A.OD2/1
DDG14:P.OP1/1 2.77 29:P/1 2.98 TYR619:A.OH/1
DDG14:P.OP1/1 2.77 29:P/1 2.66 ASP621:A.OD2/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text