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Nucleic atom dist Protein atom
DC3:I.O2/1 2.74 LYS89:C.NZ/1
DC3:I.N4/1 2.8 GLN10:C.O/1
DC4:I.OP1/1 2.99 LYS363:C.NZ/1
3DR6:I.OP2/1 3.08 SER360:C.OG/1
DC7:I.OP1/1 2.77 ASN572:C.OD1/1
DT9:I.OP1/1 2.87 GLY393:C.N/1
DA10:I.OP1/1 2.89 LYS705:C.NZ/1
DA15:I.OP1/1 2.77 LYS844:C.NZ/1
DG16:I.OP1/1 3.1 LYS800:C.N/1
DC109:J.OP1/1 3.02 LYS790:C.NZ/1
DC109:J.OP1/1 2.4 TYR791:C.OH/1
DA110:J.OP1/1 2.68 HIS804:C.NE2/1
DA110:J.OP2/1 2.68 ASN786:C.ND2/1
DT111:J.OP2/1 2.61 SER784:C.OG/1
DA112:J.OP1/1 2.85 SER735:C.N/1
DA112:J.OP1/1 2.94 SER735:C.OG/1
DA112:J.OP2/1 2.59 ASN284:C.ND2/1
DA113:J.OP1/1 2.78 GLY729:C.N/1
DA113:J.N3/1 3.19 LYS706:C.NZ/1
DG114:J.OP1/1 2.84 TYR708:C.OH/1
DG114:J.O3'/1 2.87 ASP623:C.OD1/1
DA115:J.OP1/1 2.7 ASP623:C.OD2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC7:I.O2/1 2.69 65:I/1 3.03 TYR567:C.OH/1
DT8:I.O4'/1 2.98 65:I/1 3.03 TYR567:C.OH/1
DA10:I.OP1/1 3.12 982:C/1 2.88 ALA394:C.O/1
DA10:I.OP1/1 3.12 982:C/1 2.68 VAL396:C.N/1
DT11:I.OP1/1 2.71 56:I/1 2.84 LYS705:C.N/1
DG12:I.OP1/1 2.99 965:C/1 2.65 THR703:C.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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