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Nucleic atom dist Protein atom
DA-55:I.OP1/1 2.66 SER53:D.N/1
DA-55:I.OP2/1 3.2 SER53:D.OG/1
DC-49:I.O2/1 2.69 ARG28:D.NH2/1
DC-48:I.O4'/1 2.83 ARG28:D.NH1/1
DA-44:I.OP2/1 2.44 ARG31:C.NH1/1
DG-43:I.OP1/1 2.74 ARG16:C.N/1
DG-43:I.OP2/1 3.12 ARG16:C.NE/1
DG-35:I.O3'/1 2.95 THR85:D.OG1/1
DG-34:I.OP1/1 3.17 THR85:D.N/1
DG-34:I.OP1/1 2.86 THR85:D.OG1/1
DG-34:I.OP2/1 3.23 SER84:D.N/1
DA-33:I.OP1/1 2.53 ARG83:D.NH1/1
DA-33:I.OP2/1 2.52 ARG83:D.NH2/1
DC-24:I.OP2/1 3.26 SER86:A.N/1
DA-23:I.OP1/1 2.91 ARG72:A.NH1/1
DA-23:I.OP1/1 3.07 PHE84:A.N/1
DA-23:I.OP2/1 3 ARG72:A.NH2/1
DA-13:I.OP1/1 3.26 ARG36:B.NH1/1
DA-13:I.OP1/1 2.98 ARG36:B.NH2/1
DA-13:I.OP2/1 3.3 ARG36:B.NH1/1
DC-5:I.OP1/1 3.06 ARG42:A.NE/1
DC-5:I.OP2/1 2.91 ARG42:A.NH2/1
DG-3:I.OP1/1 2.76 VAL117:A.N/1
DG-3:I.OP1/1 2.55 THR118:A.OG1/1
DT7:I.OP2/1 3.09 GLY48:F.N/1
DG8:I.OP1/1 2.62 ILE46:F.N/1
DG8:I.O3'/1 3.22 GLY44:E.N/1
DA9:I.OP1/1 2.82 GLY44:E.N/1
DA9:I.OP1/1 2.89 VAL46:E.N/1
DA9:I.OP1/1 3.01 ALA47:E.N/1
DA9:I.N3/1 2.75 ARG40:E.NH2/1
DA10:I.OP1/1 2.8 TYR41:E.N/1
DA10:I.O4'/1 3.08 ARG40:E.NH1/1
DT17:I.OP1/1 3.35 ARG69:E.NH2/1
DT17:I.OP2/1 3.05 ARG69:E.NH1/1
DT18:I.OP1/1 2.57 ARG63:E.NH1/1
DT18:I.OP1/1 2.76 LYS64:E.N/1
DT18:I.OP2/1 2.84 LEU65:E.N/1
DG27:I.OP1/1 2.82 LYS79:F.NZ/1
DC28:I.OP1/1 2.82 LYS79:F.N/1
DC28:I.OP1/1 2.8 THR80:F.N/1
DC28:I.OP1/1 2.62 THR80:F.OG1/1
DA38:I.OP1/1 2.73 ALA44:G.N/1
DT39:I.OP1/1 2.74 ARG34:G.NH1/1
DT39:I.OP1/1 3.2 VAL42:G.N/1
DT39:I.OP2/1 2.83 ARG34:G.NH2/1
DG48:I.O3'/1 2.87 ARG28:G.NH2/1
DG48:I.N2/1 2.78 ARG30:H.NH1/1
DG48:I.N3/1 3.13 ARG30:H.NH1/1
DG49:I.OP1/1 3.18 ARG28:G.NH2/1
DG49:I.OP1/1 3.1 SER33:H.N/1
DG49:I.N2/1 3 ARG28:H.NH2/1
DC59:I.OP1/1 3.06 THR75:G.N/1
DC59:I.OP1/1 2.9 ARG76:G.N/1
DC59:I.OP2/1 2.93 THR75:G.N/1
DG71:I.OP1/1 2.78 ARG42:A.N/1
DG71:I.OP1/1 2.69 THR45:A.OG1/1
DA-55:J.OP1/1 3.05 SER53:H.N/1
DA-55:J.OP2/1 3.03 SER53:H.OG/1
DA-44:J.OP2/1 3.05 ARG31:G.NE/1
DG-43:J.OP1/1 3.06 ARG16:G.N/1
DG-43:J.OP2/1 3.21 ARG16:G.NE/1
DG-34:J.OP1/1 3.19 THR85:H.N/1
DG-34:J.OP1/1 2.71 THR85:H.OG1/1
DG-34:J.OP2/1 2.95 SER84:H.N/1
DG-34:J.OP2/1 2.88 SER84:H.OG/1
DC-24:J.OP2/1 3.32 SER86:E.N/1
DA-23:J.OP1/1 2.74 ARG72:E.NH1/1
DA-23:J.OP1/1 3.11 PHE84:E.N/1
DA-23:J.OP2/1 2.94 ARG72:E.NH2/1
DC-21:J.OP2/1 2.65 LYS20:F.NZ/1
DA-13:J.OP1/1 3.01 ARG36:F.NH2/1
DA-13:J.OP2/1 2.9 ARG36:F.NH1/1
DC-5:J.OP1/1 2.53 ARG42:E.NE/1
DC-5:J.OP1/1 2.74 ARG42:E.NH2/1
DG-3:J.OP1/1 2.73 VAL117:E.N/1
DG-3:J.OP1/1 2.62 THR118:E.OG1/1
DT7:J.OP2/1 3.25 GLY48:B.N/1
DG8:J.OP1/1 2.73 ILE46:B.N/1
DG8:J.OP2/1 2.94 ARG35:B.NH2/1
DG8:J.O3'/1 3.16 GLY44:A.N/1
DA9:J.OP1/1 2.86 GLY44:A.N/1
DA9:J.OP1/1 2.84 VAL46:A.N/1
DA9:J.OP1/1 2.85 ALA47:A.N/1
DA9:J.N3/1 2.75 ARG40:A.NH2/1
DA10:J.OP1/1 2.82 TYR41:A.N/1
DA10:J.O4'/1 3.06 ARG40:A.NH1/1
DT17:J.OP1/1 2.96 ARG69:A.NH2/1
DT17:J.OP2/1 3.47 ARG69:A.NH1/1
DT18:J.OP1/1 3.25 LYS64:A.N/1
DT18:J.OP2/1 3.11 LEU65:A.N/1
DC28:J.OP1/1 2.94 LYS79:B.N/1
DC28:J.OP1/1 2.44 THR80:B.OG1/1
DA38:J.OP1/1 2.92 ALA44:C.N/1
DT39:J.OP1/1 3.02 ARG34:C.NH1/1
DT39:J.OP1/1 3.47 VAL42:C.N/1
DT39:J.OP2/1 2.94 ARG34:C.NH2/1
DG49:J.OP1/1 3.05 ARG28:C.NH2/1
DG49:J.OP1/1 3.13 SER33:D.N/1
DG49:J.OP1/1 3.19 SER33:D.O/1
DT50:J.OP1/1 3.48 LYS31:D.N/1
DC59:J.OP1/1 3.2 THR75:C.N/1
DC59:J.OP1/1 2.98 ARG76:C.N/1
DC59:J.OP2/1 3.29 THR75:C.N/1
DG71:J.OP1/1 2.78 ARG42:E.N/1
DG71:J.OP1/1 2.64 THR45:E.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT-66:I.OP1/1 3.18 1024:E/1 2.72 ARG49:E.O/1
DG-34:I.OP1/1 2.64 1018:I/1 2.85 ARG83:D.NH1/1
DG8:I.OP2/1 3.08 509:F/1 2.63 ILE46:F.O/1
DG8:I.OP2/1 3.08 509:F/1 2.61 TYR51:F.OH/1
DA10:I.OP2/1 2.69 1020:I/1 2.98 ARG49:E.NH1/1
DG49:I.OP2/1 2.98 1017:H/1 3.07 SER33:H.O/1
DG49:I.OP2/1 2.98 1017:H/1 2.59 ILE36:H.N/1
DA-13:J.OP1/1 2.92 519:F/1 2.46 THR30:F.OG1/1
DC59:J.OP1/1 2.52 1016:J/1 2.69 ARG76:C.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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