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Nucleic atom dist Protein atom
DG5:C.OP2/1 2.41 LYS339:A.NZ/1
DA6:C.OP1/1 3.25 THR301:A.N/1
DA6:C.OP2/1 2.39 THR301:A.OG1/1
DA7:C.OP2/1 2.78 GLY299:A.N/1
DG8:C.OP2/1 3.07 ARG298:A.NH1/1
DG9:C.OP2/1 2.79 ASP294:A.OD1/1
DC11:C.OP1/1 3.14 GLY187:A.N/1
DC11:C.OP1/1 3.2 THR190:A.N/1
DC11:C.OP1/1 2.52 THR190:A.OG1/1
DC11:C.OP2/1 3.37 ILE189:A.N/1
DT12:C.OP1/1 2.58 GLY185:A.N/1
DC3:D.OP2/1 3.15 ARG36:A.NH1/1
DA4:D.OP2/1 2.93 SER40:A.OG/1
DA4:D.OP2/1 3.27 ARG331:A.NH2/1
DA4:D.O5'/1 3.21 ARG331:A.NH2/1
DG5:D.OP2/1 3.36 ARG332:A.NH1/1
DA7:D.OP2/1 2.66 ILE248:A.N/1
DG8:D.OP2/1 2.74 GLY246:A.N/1
DG8:D.OP2/1 2.94 GLY246:A.O/1
DG8:D.OP2/1 2.51 ARG336:A.NH2/1
DT9:D.OP1/1 3.19 LYS243:A.N/1
DT9:D.OP2/1 3.14 LYS243:A.N/1
DT9:D.OP2/1 2.71 SER244:A.N/1
DT9:D.OP2/1 2.77 SER244:A.OG/1
DT12:D.OP1/1 3.22 ALA220:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG8:C.OP2/1 3.04 2047:A/1 2.83 SER297:A.OG/1
DG9:C.OP1/1 2.62 2008:C/1 2.65 ASP294:A.OD1/1
DG9:C.OP1/1 2.62 2008:C/1 2.65 ASP294:A.OD2/1
DT9:D.OP2/1 2.45 2008:D/1 2.98 SER244:A.OG/1
DT9:D.O5'/1 2.99 2008:D/1 2.98 SER244:A.OG/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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