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Nucleic atom dist Protein atom
DG5:E.OP2/1 2.76 LYS339:B.NZ/1
DA6:E.OP2/1 2.84 THR301:B.N/1
DA6:E.OP2/1 2.64 THR301:B.OG1/1
DA7:E.OP2/1 2.48 GLY299:B.N/1
DA7:E.OP2/1 3.09 GLY299:B.O/1
DG8:E.OP2/1 2.87 SER297:B.N/1
DC11:E.OP1/1 3.44 THR190:B.N/1
DC11:E.OP1/1 2.75 THR190:B.OG1/1
DC11:E.OP1/1 3.18 LYS221:B.NZ/1
DC11:E.OP2/1 2.94 ILE189:B.N/1
DT12:E.OP1/1 3.15 GLY185:B.N/1
DG13:E.O3'/1 2.61 SER103:B.OG/1
DG13:E.O3'/1 2.88 ASP105:B.OD1/1
DC3:F.OP1/1 2.96 ARG36:B.NH1/1
DC3:F.OP1/1 2.97 ARG331:B.NH1/1
DC3:F.OP1/1 2.91 ARG331:B.NH2/1
DA4:F.OP2/1 2.44 ARG331:B.NH2/1
DA7:F.OP2/1 2.74 ARG247:B.NE/1
DA7:F.OP2/1 2.84 ILE248:B.N/1
DG8:F.OP2/1 2.83 GLY246:B.N/1
DG8:F.OP2/1 2.77 ARG336:B.NH2/1
DT9:F.OP1/1 3.11 LYS243:B.N/1
DT9:F.OP2/1 3.12 SER244:B.N/1
DT9:F.OP2/1 3 SER244:B.OG/1
DC10:F.OP2/1 2.41 LYS243:B.NZ/1
DT12:F.OP1/1 2.59 ALA220:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC3:F.OP2/1 2.92 2040:B/1 3.21 ASN254:B.ND2/1
DC3:F.OP2/1 2.92 2040:B/1 2.57 GLU291:B.O/1
DC3:F.OP2/1 2.92 2040:B/1 2.7 ARG331:B.NH1/1
DA7:F.OP2/1 2.43 2005:F/1 3.45 ILE248:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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