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Nucleic atom dist Protein atom
DA7:C.OP2/1 3.08 THR301:A.N/1
DA7:C.OP2/1 2.81 THR301:A.OG1/1
DG8:C.O5'/1 3.27 ARG298:A.NH1/1
DG9:C.OP2/1 3.32 ARG298:A.NH1/1
DT11:C.OP1/1 2.94 LYS193:A.NZ/1
DT12:C.OP1/1 3.31 ILE189:A.N/1
DT12:C.OP2/1 3.08 GLY187:A.N/1
DT12:C.OP2/1 2.8 GLY187:A.O/1
DT12:C.OP2/1 2.86 THR190:A.N/1
DT12:C.OP2/1 2.31 THR190:A.OG1/1
DOC13:C.OP1/1 3.27 GLY185:A.N/1
DOC13:C.OP2/1 3.17 ILE186:A.O/1
DA3:E.N3/1 2.61 GLU63:A.OE2/1
DC4:E.OP1/1 2.68 GLY41:A.N/1
DC4:E.OP1/1 3.25 GLY41:A.O/1
DG6:E.OP2/1 2.68 ILE248:A.O/1
DG6:E.OP2/1 3.07 ARG332:A.NE/1
DA7:E.OP1/1 2.9 ILE248:A.N/1
DA7:E.OP2/1 3.15 ARG247:A.NH1/1
DA8:E.OP1/1 3.03 GLY246:A.N/1
DA8:E.OP1/1 2.4 ARG336:A.NH2/1
DA8:E.OP2/1 2.88 ARG242:A.NE/1
DT9:E.OP1/1 2.63 LYS243:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG9:C.N7/1 3.11 2039:A/1 2.23 SER297:A.OG/1
DA10:C.OP1/1 2.31 2007:C/1 2.9 ASP294:A.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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